Kocuria varians: CIB50_0001944
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Entry
CIB50_0001944 CDS
T06882
Symbol
polA_2
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
kvr
Kocuria varians
Pathway
kvr03030
DNA replication
kvr03410
Base excision repair
kvr03420
Nucleotide excision repair
kvr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kvr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CIB50_0001944 (polA_2)
03410 Base excision repair
CIB50_0001944 (polA_2)
03420 Nucleotide excision repair
CIB50_0001944 (polA_2)
03440 Homologous recombination
CIB50_0001944 (polA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kvr03032
]
CIB50_0001944 (polA_2)
03400 DNA repair and recombination proteins [BR:
kvr03400
]
CIB50_0001944 (polA_2)
Enzymes [BR:
kvr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CIB50_0001944 (polA_2)
DNA replication proteins [BR:
kvr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CIB50_0001944 (polA_2)
DNA repair and recombination proteins [BR:
kvr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CIB50_0001944 (polA_2)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CIB50_0001944 (polA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
QMS57218
UniProt:
A0A7D7Q4D9
LinkDB
All DBs
Position
complement(2208091..2210985)
Genome browser
AA seq
964 aa
AA seq
DB search
MTETKQQAAQDDPATRTVVIGEKTDSPQEVPLPVPVSRPEKRLLLIDGHSLAFRAFFALS
RAAEYGGGPGFVTSEGVHTEGVYGFVNTMVKLVREEKPTHLVVSFDLEGPTLRSQEYGEY
KGGRDETPEEFHGQVPNIRRILEAVGIPIVTSEGHEADDVLATLATTAAAEDFEVLVFSG
DRDAFQMITDHVTVVYPGRTPSDLRRMDAQAVFEKYKVAPQNYPDLAALTGETADNLPGV
PGVGPGFAAKWITAYGPVESLLEHAGKITGKKGEALRENEDLVRRNRKLNRLLTDLPLEI
DLADASLPHADPERVAEIFDELEFGSQLRGRLLDAFGAASGADDVATVPEITDVTRVRTA
AEFTAWREALEEGAAAVVRRLSVDPKAASGTEVTTLMLTGASGAAVDLVTADQELTAALE
AWLADPSAPKIVDGLKDLYRGLAQRGIELAGVVDDVQLSGYLVRPALRSYELEAQLAQHL
DLEVAAVAAAETPGAKDQGQTELDLDTAGEQDELDGTADAALVRQATLGGACRSLSEHLR
ALLEADGQLPLLTELEMPLAVILARMEAAGIAMDRPGIDRLHEDLQQPIDQAFELAQAQI
DHEINLGSTKQLQAVMFDELGLPKTKKTKTGYTTDASAVADLLGRVDPETQGSRFLVALM
NWREYSKLKQIVAGLRDAIAEDGRIHTTYQQTVAATGRLSSTGPNLQNIPVRTEQGQRIR
DVFVVGEDAQGPFECLMTADYSQIEMRIMAHLSGDEGLIEAFRAGEDLHRFVGSRVFEVA
PEEVTSAMRSKVKAMSYGLVYGLSSYGLSQQLHIGVDEARTMMSGYFERFGGVRDFLRGV
VEEARSKGYTETIDGRRRYLPDLTSDNRQARQAAERMALNAPIQGSAADIIKKAMIGVDR
ALDQGGLRSRVLLQVHDELIVEVAPGESEAVEKILRTEMAGAADLTVPLDVNVGTGRTWH
QAAH
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
gtgactgagacgaagcagcaggccgcccaggacgatcccgccacccgcaccgtggtgatc
ggcgagaagaccgactccccgcaggaggtcccgctgcccgtgcccgtctcgcggccggag
aagcggctgctgctgatcgacgggcactccctggcgttccgcgcgttcttcgcactctcc
cgcgccgccgagtacggcgggggccccggtttcgtgacctctgagggcgtgcacaccgag
ggcgtgtacgggttcgtgaacaccatggtcaagctcgtgcgcgaggagaagcccacccac
ctggtggtctccttcgacctcgagggccccaccctgcgctcccaggagtacggggagtac
aagggcggccgggacgagaccccggaggagttccacgggcaggtccccaacatccgccgc
attctcgaggccgtgggcattccgatcgtgacgagcgagggccacgaggcggacgacgtc
ctggccacgctcgccaccaccgcggccgccgaggacttcgaggtgctcgtgttctcgggg
gaccgggacgcgttccagatgatcacggaccacgtcaccgtggtgtacccgggccgcacg
ccgtcggacctgcgccgcatggacgcgcaggcggtcttcgagaagtacaaggtcgccccg
cagaactacccggacctcgccgccctgacgggagagaccgcggacaacctgccgggcgtc
cccggcgtgggccccggcttcgccgccaagtggatcaccgcctacggtcccgtggagtcc
ctgctggagcacgccgggaagatcaccggcaagaagggcgaggcgctgcgcgagaatgag
gacctcgtccgccgcaaccgcaagctcaaccggctgctcactgacctgccgctggagatc
gacctcgcggacgcctccctgccgcacgcagaccccgagcgcgtcgcggagatcttcgac
gagctcgagttcggttcacagctgcgcgggcgcctcctggacgccttcggggccgcctcg
ggggccgacgacgtcgccacggtccccgagatcacggacgtcacccgggtgcgcaccgcc
gcggagttcaccgcgtggcgcgaggcgcttgaggagggtgccgccgccgtcgtccgccgt
ctgtcggtggatcccaaggcggcctccggcaccgaggtcaccacgctcatgctcacgggc
gcgagcggcgcggccgtggacctggtcaccgcggaccaggagctgaccgcggccctcgaa
gcgtggctcgcggacccctccgcgcccaagatcgtggacgggctcaaggacctctaccgc
gggctggctcagcgcgggatcgaactcgctggcgtggtggacgacgtccagctctccggg
tacctggtgcgccccgccctgcgcagctacgagctggaggcgcagctcgcccagcacctc
gacctcgaggtggcggcggtggccgcggccgagacgcccggcgcgaaggaccagggacag
accgagctggacctcgacaccgccggtgagcaggacgagctcgacggcaccgcggacgcg
gcgctcgtgcgccaggccaccctgggcggtgcgtgccggtcgctgagcgagcacctgcgc
gcgctgctcgaagcggacgggcagctgccgctgctcacggagctggagatgccgctcgcg
gtgatcctcgcccgcatggaggcggcggggatcgccatggaccgcccagggatcgaccgg
ctgcacgaggacctgcagcagcccatcgaccaggccttcgagctcgcccaggcgcagatc
gaccacgagatcaacctgggctccaccaagcagctgcaggccgtgatgttcgacgagctg
ggcctgcccaagaccaagaagacgaagaccggctacaccacggacgcctccgccgtcgcg
gacctgctgggccgggtggaccccgagacgcagggctcgcgcttcctcgtggcgctgatg
aactggcgcgagtactccaagctcaagcagatcgtcgccgggctgcgggacgcgatcgcc
gaggacggccgcatccacaccacctaccagcagaccgttgccgccaccggtcgcctgtcc
tccaccggacccaacctgcagaacatcccggtgcgcaccgagcagggccagcgcatccgg
gacgtgttcgtggtgggggaggacgcccaggggcccttcgagtgcctcatgaccgcggac
tactcccagatcgagatgcggatcatggcccacctctccggggacgagggcctgatcgag
gcgttccgcgcgggggaggacctgcaccgcttcgtgggctcgcgcgtgttcgaggtggcg
ccggaggaggtcacctccgccatgcgctccaaggtcaaggccatgagctacggactggtc
tacggtctgagctcctacggcctctcgcagcagctgcacatcggcgtggacgaggcccgc
accatgatgagcgggtacttcgagcgcttcggcggcgtgcgggacttcctgcgcggcgtc
gtcgaggaggcccgttccaagggctacaccgagaccatcgacgggcgccgccgctacctg
ccggacctcacgagcgacaaccgccaggcccgccaggccgcggagcgcatggcactgaac
gcgcccatccagggctcggcggcggacatcatcaagaaggcgatgatcggcgtggaccgg
gcgctggaccagggcgggctgcgctcccgcgtgctgctgcaggtccacgacgaactgatc
gtggaggtggccccgggcgagtccgaggccgtggagaagatcctgcgcaccgagatggcc
ggcgccgcggacctcaccgtccccctggacgtcaacgtgggcaccgggcgcacctggcac
caggccgcccactga
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