KEGG   Kocuria varians: CIB50_0001963
Entry
CIB50_0001963     CDS       T06882                                 
Symbol
ribD
Name
(GenBank) Riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
kvr  Kocuria varians
Pathway
kvr00740  Riboflavin metabolism
kvr01100  Metabolic pathways
kvr01110  Biosynthesis of secondary metabolites
kvr01240  Biosynthesis of cofactors
kvr02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:kvr00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    CIB50_0001963 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CIB50_0001963 (ribD)
Enzymes [BR:kvr01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     CIB50_0001963 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     CIB50_0001963 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Bd3614-deam PknG_rubred
Other DBs
NCBI-ProteinID: QMS57236
UniProt: A0A7D7PZN1
LinkDB
Position
complement(2232123..2233589)
AA seq 488 aa
MTADDDAARPRPRGGHHAAGGENFTPAEAAAMRAALTAAQRGVRGANPVVGAALVDAAGT
LLHVGHHRGAGTDHAEVDVLRQARAAGTPLGDTTLLVTLEPCHHTGRTGPCSAAILAAGI
PRVVFAVPDATDAARGGGAHLAAYGVDVRHGLLAEPARDLNERWFLAQRRRRPFVTLKLA
QSLDGRVAAADGTSQWITGAPARAEGHALRARVDAILVGGGTLRADDPSLTARDAHGTPV
ERQPLRAVMSTEPVSEHARVRCGVAAGESTARSGASGDDGRFVHLATHDPAEALQALREL
GAAHVLVEGGPTVSAAFLAADLVDELWLYQAPLLLGEGSASVAPLGIGTLTGASRWRSDP
VGLPKGGSPVAAVGEDLRWHLRPAPRETVFPDSDLHAATFDTAATSAPAPQSPATQNSTT
QDLTTQDPTTQDLAPHDPGPSHTAMPGAAQHCAAPPDPASRRAAAPGPAPAVAAAQQPPA
HTVAPRGA
NT seq 1467 nt   +upstreamnt  +downstreamnt
gtgacggctgacgacgacgccgcgcggccgcgtccccgcggcggtcaccacgccgcgggc
ggggagaacttcactcccgccgaggcagccgccatgcgggcggcactgactgcggcccag
cggggtgtgcgcggcgcgaaccccgtggtgggcgccgctctcgtcgacgccgccggaacg
ctgctgcacgtgggccaccaccgcggggcgggcacggaccacgccgaggtggacgtgctg
cggcaggcccgcgcggcggggacgccgctgggcgacaccaccctgctggtgaccctcgaa
ccgtgccaccacaccgggcgcactggcccgtgctccgccgcgatccttgcggccgggatt
ccccgcgtggtcttcgcggtgccggacgccacggatgccgcacgcggcggtggggcccac
ctcgccgcgtacggggtggacgtgcgccacgggctgctggccgagccggcccgtgacctg
aacgaacgctggttcctggcgcagcggcgtcgtcggccgttcgtgaccctcaagctcgcc
cagagcctcgacggcagggtggccgccgcggacggcacgagccagtggatcaccggcgcg
cccgcccgggccgagggccacgcgctgcgcgcgcgggtggacgcgatcctggtgggcggt
ggcacgctgcgcgcggacgatccgtccctcacggcccgggacgcccacgggacgccggtc
gagaggcagccgctgcgcgcggtgatgtccacggagccggtgtcggagcacgcgcgcgtg
cgctgtggtgtcgcggcgggggagagcacagcccggtccggggcctccggcgacgacgga
aggttcgtccacctggcaacccacgaccctgccgaggcgctgcaggccctccgcgagctc
ggcgccgcccacgtgctcgtggagggcgggcccaccgtgagcgcggcgttcctcgccgcg
gacctcgtggacgagctgtggctctaccaggcacccctgctgctgggggagggctccgca
tccgtggccccgctcgggatcggcacgctcacgggggcctcgcgctggcggagcgatccg
gtggggctaccaaagggcggatcccccgtggcggcggtgggcgaagacctccgctggcac
ctgcggcccgcaccccgggagacggtgttcccggactcggacctgcacgcagcgacgttc
gacacggcggcgaccagcgccccggcgccacagagcccagccacgcagaactccaccaca
caggatctgaccacgcaggatcccaccacgcaggatctggcgcctcacgaccctggccca
tcccacacggcgatgcccggtgcagcacagcactgtgccgccccgcccgatccggcatcc
cgccgcgcagcggctcccggtccggcacccgccgttgccgctgctcagcaaccgcccgcc
cacacagtcgcaccgcgcggcgcctga

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