Kocuria varians: CIB50_0002121
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Entry
CIB50_0002121 CDS
T06882
Symbol
smc
Name
(GenBank) Chromosome partition protein Smc
KO
K03529
chromosome segregation protein
Organism
kvr
Kocuria varians
Brite
KEGG Orthology (KO) [BR:
kvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
kvr03036
]
CIB50_0002121 (smc)
Chromosome and associated proteins [BR:
kvr03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
CIB50_0002121 (smc)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
SMC_hinge
AAA_29
ABC_tran
MukB
Motif
Other DBs
NCBI-ProteinID:
QMS57382
UniProt:
A0A7D7Q4S6
LinkDB
All DBs
Position
complement(2425561..2429211)
Genome browser
AA seq
1216 aa
AA seq
DB search
MHLKTLTVRGFKSFASATTFDFEPGVTAVVGPNGSGKSNVVDALAWVMGEQGAKSLRGGK
MEDVIFAGTSGRAALGRAHVSLTIDNADGALPIEYSEVTISRTLFRSGGSEYAINGRSCR
LLDIQELLSDSGLGREMHVIVGQGQLDRILQATPEDRRGFIEEASGILKHRRRKEKTLRK
LESVQANLDRLEDLTGEIQRQLTPLGRQARTARKAQRIQYDVRDARARLLADDLVAARAG
MDTDQGASTEARRRRDELEKSAAALAERLQETETRAAQTAPALNAARTSWYELSTVRDRF
RALSALAGERRRLLGSAEEPAPQGRDAGALEEQAARTLAEAERLAERVAEAQQTLDREHA
AKESAEDAARAAEAHSAELVRRAADRRAGQARLAAAATAARSGLTAAEADVERVRTEITD
VVARAERARLETSSLAEAAETTAARAQQAGDRAREAEEAAEAAQRESRAAESRRQAAASE
LKTNTVRLETLRQSVRQPDGSASVADVVPVLGEVPRAVRVTPGWERAVAAALGPWSEALA
VSSHTAAARVFAQLTETGQGRVHLVVSGGDDDARDPAVARLTLPEGCVGAAEVVSAGETG
GDAARVLAAVRAELATTVLAPDAETAVRVLDLARSRDESTANAVRVATSDGSVYSRHRAQ
GGAAEAAGPLELYALIEQAESRTAELRDAAEQAAREAERAEARRARAVAAAREAGQESTR
SQKEAAAAGAALSRAEATASSADSELKRRQDVLATAEQRLSQRDDELRRAVERAESAETG
DEEDLEREQLAAAAAKDRAEAAARAAREAETEARLALRGLEEQQRHAASRAEAQARAARS
ERAAQAEAARRAERRRVQARVALAVATAAEHLRARAEEATREAAAERDEIETRRAGLDEA
AQRLRAERDEVTKDLAQITEKLHRAELDLAQRRARLEGLETTALEELGLTPDFLVDHYGP
HLPVPDADAVLEEAQRAEEEDTPRQLELPKMTDPGAPFRREEQEARLQRAQKQLKALGKV
NPLALEEFAALEERHTFLVTQLEDVKNSRTDLRNIIRDVDRHVEEVFTQAYRDTAEQFVS
VFATLFPGGEGRLRLTDPDDMLNSGVEVEARPAGKKIKRLSLLSGGERSLTAIALLVAIF
KARPSPFYVMDEVEAALDDRNLGRLLTIFEQLKESSQLIIVTHQKRTMEIADALYGVSMR
GDGVSLVVGQQLSQLR
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
gtgcacttgaagacactcaccgtgcgtggtttcaagtccttcgcctccgccaccaccttc
gacttcgagcccggggtcaccgccgtggtggggcccaacggctcgggcaagtccaacgtg
gtggacgccctcgcctgggtgatgggcgagcagggcgccaagtcgctgcgcggcgggaag
atggaggacgtcatcttcgcgggcacctccggccgtgccgccctggggcgcgcacacgtc
tcactgaccatcgacaacgcggacggtgcgctgccgatcgagtactcggaggtcacgatc
tcccgcacgctcttccgctcgggcggctccgagtacgcgatcaacggtcgctcgtgccgg
ctgctggacatccaggagctgctctcggactccgggctgggccgtgagatgcacgtgatc
gtgggacaggggcagctggaccggatccttcaggccacgcccgaggaccgccgcggcttc
atcgaggaggcctcggggatcctcaagcaccggcgccgcaaggagaagaccctgcgcaag
ctcgagtccgtgcaggcgaacctggaccggctcgaggacctcaccggggagatccagcgt
cagctgaccccgctcgggcggcaggcccgcaccgcgcgcaaggcgcagcggatccagtac
gacgtgcgggacgcccgcgcccgcctgctcgccgacgacctcgtggccgcccgcgcggga
atggacacggaccagggggcgagcacggaggcccggcgtcgcagggacgagctggagaag
tccgccgccgcgctcgcggagcggctgcaggagaccgagacccgggctgcgcagaccgcc
cccgcgctgaacgccgcgcgcaccagctggtacgagctgagcaccgtgcgggaccgcttc
cgggcgctgtccgcgctcgcgggggagcggcgtcggctgctcggcagcgcggaggagccc
gctccccaggggcgggacgcgggcgccctcgaggagcaggccgcgcgcacgctcgccgag
gccgagcggctcgcggaacgggtcgcggaggcccagcagaccctggaccgcgagcacgcg
gcaaaggagtccgcggaggacgcggcccgcgcagccgaggcccactccgcagagctcgtg
cggcgcgccgccgaccggcgggcgggccaggcgcggctcgcggcggcggccacggccgcg
cgctcagggctcacggcggccgaggcggacgtggagcgcgtccgtaccgagatcacggac
gtcgtcgctcgcgccgagagggcccggttggagacctcatccctcgcggaggcggcggag
accacggccgcccgggcccagcaggcgggcgaccgggcccgggaggcagaggaggccgcc
gaggccgcccagcgcgagagccgcgccgcggagtcccgcaggcaggccgccgcgagcgag
ctgaagaccaacaccgtgcgtctggagacgctgcgccagtccgtgcgccagccggacggc
tccgcctccgtggcggacgtggtccccgtcctgggtgaggtgccgcgggccgtgcgcgtg
acccccgggtgggagcgcgccgttgccgcggccctcgggccgtggtcggaggcgctcgcc
gtctcctcgcacaccgcggcggcgcgcgtcttcgcgcagctcacggagacggggcagggc
cgggtgcaccttgtggtctcaggaggggacgacgacgcccgggacccggccgtggcccgg
ctcacccttccggagggctgcgtgggcgccgccgaggtcgtgagcgcgggggagaccggc
ggggacgccgcccgggtgctcgcggcggtgcgcgccgaactggcgaccaccgtcctcgcc
cctgatgcggagacggctgtgcgggtgctggacctcgcgcgctcgcgggacgagagcacg
gccaacgcggtgcgcgttgccacgagcgacggcagcgtgtactcccggcaccgggcgcag
ggcggtgcggcggaggcggcgggaccgctggagctctacgcgctgatcgaacaggcggag
tcccgcaccgccgagctgcgggacgctgccgagcaggccgcccgtgaggccgaacgcgcg
gaggcgcggcgcgcgcgagccgtcgccgcggcgcgggaggccgggcaggagtccacccgg
tcccagaaggaggccgctgcagcaggagcggcgctgagcagggcagaggccacggcgtcg
tcggcggactcggagctgaagcgccgccaggacgtgctcgccacggccgagcagcggctg
tcccagcgcgacgacgagctgcgccgcgccgtcgagcgcgcggagtccgcggagaccggg
gacgaggaagacctcgaacgtgagcagctcgcggccgccgcggcgaaggaccgcgccgag
gctgccgcgcgcgccgcccgggaggcggagaccgaggcccggctcgctctgcgcgggctc
gaggagcagcagcgccacgcggcgtcccgtgccgaggcgcaggccagggccgcccgctcc
gagcgggccgcgcaggccgaggccgcccgccgcgcggaacgtcgccgggtgcaggcccgg
gtcgcgctcgccgtcgccaccgccgcggagcacctgcgggcgcgagcggaggaggcgacc
cgtgaggccgccgccgagcgggacgagatcgagacccggcgcgccggactcgacgaggcc
gcccagcggctgcgagcggaacgcgacgaggtcacgaaggacctggcccagatcacggag
aagctgcaccgcgcggagctggacctggcgcagcggcgcgctcggctcgagggactggag
accaccgcgctcgaggagctggggctgaccccggacttcctggtggaccactacgggccg
cacctgccggtgccggatgcggacgcggtcctggaggaggcacagcgggccgaggaggag
gacactccgcgacagctcgagctgccgaagatgaccgaccccggcgcgccgttccgccgg
gaggagcaggaggcccggctgcagcgcgcgcagaagcagctcaaggcgctcggcaaggtc
aacccgctcgcgctcgaggagttcgcggcgctggaggagcggcacacgttcctggtcacc
cagctggaggacgtcaagaactcccgcacggacctgcgcaacatcatccgggacgtggac
cggcacgtggaggaggtcttcacgcaggcctaccgggacaccgccgagcagttcgtctcc
gtgttcgccaccctgttcccgggcggcgaggggcggctgcggctcacggatccggacgac
atgctcaactccggcgtggaggtcgaggcccgacccgccggcaagaagatcaagcggctc
tcgctgctctccggcggtgagcgctccctgaccgcgatcgccctgctggtggccatcttc
aaggcccgcccgtccccgttctacgtgatggacgaggtcgaggccgccctggacgaccgc
aacctgggccggttgctcaccatcttcgagcagctcaaggagagctcgcagctgatcatc
gtgacccaccagaagcgcaccatggagattgcggacgccctctacggggtgtccatgcgg
ggcgacggcgtgagcctggtggtggggcagcagctgtcgcagctgcggtag
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