Kocuria varians: CIB50_0002173
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Entry
CIB50_0002173 CDS
T06882
Symbol
dinG_2
Name
(GenBank) putative ATP-dependent helicase DinG
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
kvr
Kocuria varians
Pathway
kvr03030
DNA replication
kvr03430
Mismatch repair
kvr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kvr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CIB50_0002173 (dinG_2)
03430 Mismatch repair
CIB50_0002173 (dinG_2)
03440 Homologous recombination
CIB50_0002173 (dinG_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kvr03032
]
CIB50_0002173 (dinG_2)
03400 DNA repair and recombination proteins [BR:
kvr03400
]
CIB50_0002173 (dinG_2)
Enzymes [BR:
kvr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CIB50_0002173 (dinG_2)
DNA replication proteins [BR:
kvr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CIB50_0002173 (dinG_2)
DNA repair and recombination proteins [BR:
kvr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CIB50_0002173 (dinG_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
QMS57430
UniProt:
A0A7D7KZJ1
LinkDB
All DBs
Position
complement(2487910..2488491)
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AA seq
193 aa
AA seq
DB search
MPVSFTAIDFETANRSLASACALGVVRVQDGQVVDTRYSLLRPPPGHDAFEPGNIRIHGI
RPADVQNAPTFETAWGWVCRTITPQDPDAVLVAHNAVFDTGVVKAANNACGGAARAWDYA
CTLRLSRAAYTLRSYALPSASRAAGAEVQDHHNALSDALACAGIVRDLARRSGADSMAEL
AAHYGVRMQRGEL
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgtcagtttcaccgccatcgacttcgagaccgccaaccgcagcctggcctccgca
tgcgccctgggcgtggtgcgggtccaggacggacaggtggtcgacacgcgctactcgctg
ctccggccacctccgggccacgacgccttcgagccgggaaacatccggatccacggcatc
cggcccgcggacgtccagaacgccccgaccttcgagacggcctggggctgggtgtgccgc
acgatcactccgcaggacccggatgcggtgctcgtggcgcacaatgcggtgttcgacacg
ggggtcgtcaaggcagccaacaacgcctgcggcggggcggcccgggcgtgggactacgcg
tgcaccctgcggctctcccgcgcggcgtacaccctgcgctcctacgcgctgccctcggcc
tcgcgcgcggcgggggccgaggtgcaggaccaccacaacgcgttgagcgacgcactggcc
tgcgcgggaatcgtgcgggacctggcgcggcgcagcggggccgacagcatggccgagctc
gcggcgcactacggggtgaggatgcagcgcggagaactctga
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