Kocuria varians: CIB50_0002296
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Entry
CIB50_0002296 CDS
T06882
Symbol
uvrD2
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
kvr
Kocuria varians
Pathway
kvr03420
Nucleotide excision repair
kvr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kvr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CIB50_0002296 (uvrD2)
03430 Mismatch repair
CIB50_0002296 (uvrD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kvr03400
]
CIB50_0002296 (uvrD2)
Enzymes [BR:
kvr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CIB50_0002296 (uvrD2)
DNA repair and recombination proteins [BR:
kvr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CIB50_0002296 (uvrD2)
MMR (mismatch excision repair)
Other MMR factors
CIB50_0002296 (uvrD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PG_binding_2
Motif
Other DBs
NCBI-ProteinID:
QMS57549
UniProt:
A0A7D7L250
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All DBs
Position
complement(2630129..2631937)
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AA seq
602 aa
AA seq
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MVSVTEQRLEEQSAEERILGGLDPEQRAVATTLHGPVCVRAGAGTGKTRAITHRIAWGIA
SGVYTPQKTLALTFTARAANEMRQRLRVLGAPGVQARTFHSAALRQLQYFWPQAVGGPPP
EIVNHKARLITEAAQAMRLTTDRATVRDVAAQIEWAKVTMLTPDTYVQAAEGRDMPAGWD
VRTMQRLYQSYEDLKADRHLIDFEDVLLITVGILEEDERIAAAVHSQYRQFVVDEYQDVS
PLQQRLLDAWLGSRDDLCVVGDASQTIYSFTGATSRHLLEFPARYQGATVVELVRDYRSS
PQVVNTANRLLAARRPTLGSAPDTWATPLRLVSQRPAGPEPTWNEYPDDEAEAAGVAVRI
RDLIDDGVAPHEIAVLFRTNGQSQAFEAALADADIGFQLRGSERFFNRPEIRQAIVQIRS
AARTEGADRADVPQQVRDMLRSLGYSDRAPRSDSATRARWESLRALVSLSDTMAARAAEK
DETLSLAGFAQELERRATTQEAPVMDGVTLASMHSAKGLEWDAVFLAGLSEGLMPISFAD
TPEAVDEERRLLYVGITRAREHLVFSWSLSRTPGGRPNRSRSRFLDAVLPPASGTPARRR
SR
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
gtggtgagcgtgacggagcagcgtctggaggagcagagcgcggaggagcggatcctgggc
gggctggacccggagcagcgcgccgtggccaccaccctgcacggaccggtgtgcgtgcgg
gccggagcgggcacgggaaagacccgcgcgatcactcaccggatcgcgtgggggatcgcc
tccggcgtgtacaccccgcagaagacactggccctgaccttcacggcgcgggcggccaac
gagatgcggcagcggctgcgcgtgctcggggcccccggcgtgcaggcccgcaccttccac
tcggccgcgctgcggcagctgcagtacttctggccgcaggccgtgggcgggccgccgccg
gagatcgtcaaccacaaggcccggctgatcaccgaggccgcgcaggccatgaggctcacc
acggaccgcgccaccgtccgcgacgtcgccgcgcagatcgagtgggcgaaggtcaccatg
ctcaccccggacacctacgtccaggcggcggagggccgggacatgcccgcgggctgggac
gtgcgcaccatgcagcggctctaccagtcctacgaggaccttaaggcggaccgccacctc
atcgacttcgaggacgtcctgctgatcaccgtgggcatcctggaggaggacgagcggatt
gccgcggcggtccactcccagtaccgccagttcgtagtggacgagtaccaggacgtctcc
ccgctgcagcagcgcctgctcgacgcgtggctcggctcccgggacgacctctgcgtggtg
ggggacgcctcccagaccatctactcgttcaccggcgccacctcccggcacctgctggag
ttcccggcgcgctaccagggggccacggtcgtggagctcgtgcgggactaccgctcgagc
ccgcaggtggtcaacaccgccaacaggctgctcgccgcccgccgccccacgctcggctcc
gcgccggacacgtgggccaccccgctgcgtctggtctcccagcgcccggctgggcccgag
cccacctggaacgagtacccggacgacgaggccgaggccgccggcgtcgcggtccggatc
cgggatctcatcgacgacggtgtggcgccccacgagatcgccgtcctgttccgcaccaac
gggcagtcgcaggccttcgaggcggcgctcgcggacgcggacatcggcttccagctgcgc
ggctcggagcggttcttcaaccgccccgagatccgccaggccatcgtgcagatccgctcc
gccgcccgcaccgagggcgcggaccgggcggacgtgccccagcaggtgcgggacatgctg
cgctcgctcggctacagcgaccgcgcaccgcgctcggacagcgccacgcgggccaggtgg
gagtcgctgcgcgcactcgtctcgctgtcggacaccatggccgcccgcgcggcggagaag
gacgagacgctgtcactcgcgggtttcgcccaggagctcgagcgccgcgccaccacccag
gaggcacccgtgatggacggggtcacgctcgcctcgatgcactccgcgaagggcctggag
tgggacgccgtcttcctcgccgggctctccgaggggctcatgcccatctccttcgcggac
accccggaggccgtggacgaggaacggcgtctgctctacgtggggatcacccgcgcgcgc
gagcacctcgtgttctcgtggtcgctctcgcgcacgccgggtgggcgtccgaaccgctcg
cgctcgcggttcctcgacgccgtgctgcccccggcgtcgggcacgcccgcgcgtcgtcgt
tcccggtag
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