Kocuria varians: CIB50_0002356
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Entry
CIB50_0002356 CDS
T06882
Symbol
icd
Name
(GenBank) Isocitrate dehydrogenase [NADP]
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
kvr
Kocuria varians
Pathway
kvr00020
Citrate cycle (TCA cycle)
kvr00480
Glutathione metabolism
kvr00720
Other carbon fixation pathways
kvr01100
Metabolic pathways
kvr01110
Biosynthesis of secondary metabolites
kvr01120
Microbial metabolism in diverse environments
kvr01200
Carbon metabolism
kvr01210
2-Oxocarboxylic acid metabolism
kvr01230
Biosynthesis of amino acids
kvr04146
Peroxisome
Module
kvr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
kvr_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
kvr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CIB50_0002356 (icd)
09102 Energy metabolism
00720 Other carbon fixation pathways
CIB50_0002356 (icd)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
CIB50_0002356 (icd)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CIB50_0002356 (icd)
Enzymes [BR:
kvr01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
CIB50_0002356 (icd)
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Gene cluster
GFIT
Motif
Pfam:
IDH
DUF2383
MRP-S31
Motif
Other DBs
NCBI-ProteinID:
QMS57609
UniProt:
A0A7D7L266
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All DBs
Position
2702332..2704545
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AA seq
737 aa
AA seq
DB search
MPKIIYTETDEAPMLATYSFKPMVEAFASTAGVEVETRDISLAARILAQFPDRLTDEQRV
PDTLAELGELAKTPEANIVKLPNISASIPQLKATIKELQADGYDLPDYPEDASSDEAKEI
RARYDRVKGSAVNPVLREGNSDRRAPKAVKEYAKKHPHTMGAWRKDSKTNVATLGHDDFR
TNEQSVVMPADDTLTIQLVTDHGTTVLKQSVPVLAGEVVDATFMSAAALDAFLEEQVTRA
KAEGVLFSAHLKATMMKVSDPIIFGHVVKAFFKDVLQRYGTDLEKAGLSPNDGLAAILSG
VSKLENGEEIAAAFQEAIDNGPELAYVNSDKGVTNLHVPSDVIVDASMPAMIRTSGQMWG
REGEQKDTLAVLPDSSYAGVYQTVIDDCRENGAYDPTTMGTVPNVGLMAQKAEEYGSHDK
TFEIPEAGTVQVVNSAGDVLMSHDVQPGDIWRACQAKDAPIKDWVQLAVRRSRESGMPAV
FWLDETRAHDRNLIEKVNTYLADEDTDGLDIRILSPVDATAFTIERLRRGEDTISVTGNV
LRDYLTDLFPILELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQVLEENHLRWDSLG
EFLALAASFEHLATRYDNAKAQVLADTLDRATGTFLDENKSPSRKVNELDNRGSHFYLAM
FWAEELAKQTEDPELAQAFQKVASELRANEETINAELLGVQGSPADLGGYYWPKPELVSG
VMRPSATLNRIMDSLSA
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagatcatctacaccgagaccgacgaagcacccatgttggccacgtactcgttc
aagcccatggtggaggccttcgcgtcgaccgccggtgtggaggtggagacccgggacatc
tccctggccgcccgcatcctggcccagttcccggaccggctcacggacgagcagcgcgtc
ccggacaccctggccgagctgggggagctcgccaagaccccggaagccaacatcgtgaag
cttcccaacatctccgcgtccatcccgcagctcaaggccaccatcaaggagctgcaggcg
gacggctacgacctcccggactacccggaggacgcctcctcggacgaggccaaggagatc
cgcgcgcgctacgaccgcgtcaagggctcggccgtgaaccccgtgctgcgcgagggcaac
tcggaccgccgcgcgccgaaggccgtcaaggagtacgccaagaagcacccgcacaccatg
ggcgcttggcgcaaggactcgaagaccaacgtggccaccctgggccacgacgacttccgc
accaacgagcagtccgtggtcatgccggcggacgacaccctcaccatccagctcgtcacg
gaccacggcaccacggtgctcaagcagtccgttcccgtgctcgccggcgaggtcgtggac
gccacgttcatgagcgccgccgcactggacgcgttcctcgaggagcaggtgacccgcgcc
aaggcggagggcgtcctcttctctgcgcacctgaaggccaccatgatgaaggtctcggac
cccatcatcttcggccacgtggtcaaggcgttcttcaaggacgtcctgcagcgctacggc
acggacctcgagaaggcgggtctgtcccccaacgacggcctggcagcgatcctctccggg
gtctccaagctcgagaacggcgaggagatcgccgccgcgttccaggaggccatcgacaac
ggccccgagctcgcctacgtgaactcggacaagggcgtcaccaacctgcacgtgccctcg
gacgtgatcgtggacgcctccatgcccgcgatgatccgcacctccgggcagatgtggggc
cgcgagggcgagcagaaggacaccctggccgtgctgccggactcctcctacgccggcgtg
taccagacggtcatcgacgactgccgcgagaacggcgcgtacgaccccaccaccatgggc
accgtgccgaacgtgggactgatggcgcagaaggccgaggagtacggctcccacgacaag
accttcgagatccccgaggccggcacggttcaggtggtcaactccgccggtgacgtgctg
atgtcccacgacgtgcagcccggtgacatctggcgcgcgtgccaggccaaggacgccccc
atcaaggactgggtgcagctggccgtgcgtcgctcccgcgagtccgggatgcccgccgtg
ttctggctggacgagacccgcgcccacgaccgcaacctcatcgagaaggtcaacacctac
ctcgcggacgaggacacggacgggctggacatccgcatcctctcccccgtggacgccacc
gcgttcaccatcgagcgcctgcgccgcggcgaggacaccatctccgtgaccggcaacgtg
ctgcgcgactacctcacggacctgttccccatcctggagctgggcacctccgcgaagatg
ctctcgatcgtcccgctgatgaacggcggcggcctgttcgagaccggtgcgggcggctcc
gcgcccaagcacgtgcagcaggtcctcgaggagaaccacctgcgctgggactccctgggc
gagttcctggccctcgcggcgtccttcgagcacctcgccacccgctacgacaacgccaag
gcacaggttctcgcggacaccctggaccgggccaccggcacgttcctggacgagaacaag
tccccgtcacgcaaggtcaacgagctcgacaaccgcggctcgcacttctacctggccatg
ttctgggccgaggagctggccaagcagaccgaggatcccgagctcgcgcaggccttccag
aaggtcgcctccgagctgcgcgccaacgaggagaccatcaacgccgagctgctcggcgtg
cagggctcccccgcggacctcggcggctactactggccgaagccggagctggtctcgggc
gtcatgcgcccctccgccacgctgaaccggatcatggactcgctctccgcctga
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