Kocuria varians: CIB50_0002361
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Entry
CIB50_0002361 CDS
T06882
Name
(GenBank) hypothetical protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
kvr
Kocuria varians
Pathway
kvr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kvr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CIB50_0002361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kvr03400
]
CIB50_0002361
Enzymes [BR:
kvr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CIB50_0002361
DNA repair and recombination proteins [BR:
kvr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CIB50_0002361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QMS57614
UniProt:
A0A7D7PTA3
LinkDB
All DBs
Position
complement(2707757..2708605)
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AA seq
282 aa
AA seq
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MSETPERLLPHPLTGQLFASPVPPGTGWPEDPAAPDTPVAHTARQVRELAATAQDVDQLN
ALCSVCSACERLVEWREDVAERKRASFAGEPYWGRPVPSYGDPHARFAVVGLAPAANGGN
RTGRMFTGDRSGGWVYAALHRAGYAEHETVSTAGDGQALHGVRMIAPVRCAPPANKPTPE
EKATCSGWFDREIELLPELRGMLALGGIAWQTVLAATARMGWEVPRPRPKFGHGAVAWLR
TPDGRDIRLVGCYHVSQRNTFTGLLTEQMLDDALALAAAPVE
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagacccctgagcggctgctgccacaccctctgaccggtcagctgttcgcgtcg
cccgtgccgcccgggacaggatggcccgaggaccccgccgcgccggacacccccgtggcg
cacaccgcgcggcaggtccgcgagctcgcggcgaccgcccaggacgtggaccagctcaac
gccctgtgcagcgtgtgcagcgcgtgcgagcggctggtcgagtggcgggaggacgtggcc
gagcgcaagcgcgcctccttcgccggtgagccctactggggcaggcccgtgccgtcctat
ggggatccgcacgcgcggttcgccgtcgtcgggcttgcccccgcggcgaacgggggcaac
cgcacgggccgcatgttcaccggcgaccgctccgggggctgggtctacgcggccctccac
cgggcgggttacgccgagcacgagaccgtctccaccgccggggacggccaggcgctgcac
ggcgtccgcatgatcgccccggtgcgctgcgcaccaccggccaacaaacccaccccggaa
gagaaggccacctgcagcggctggttcgaccgcgagatcgagctgctgccggagctgcgc
ggcatgctggccctcggcggcatcgcgtggcagacggtcctcgcggccaccgcccgcatg
ggctgggaggttccccggcccagacccaagttcggccacggcgcggtcgcgtggctgcgc
accccggacgggcgggacatccggctcgtgggctgctaccacgtgagccagcgcaacacc
ttcacgggcctgctgaccgagcagatgctcgacgacgccctggcactggccgccgcgccc
gtcgagtga
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