Kocuria varians: CIB50_0002371
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Entry
CIB50_0002371 CDS
T06882
Symbol
selB
Name
(GenBank) Selenocysteine-specific elongation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
kvr
Kocuria varians
Brite
KEGG Orthology (KO) [BR:
kvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
kvr03012
]
CIB50_0002371 (selB)
Translation factors [BR:
kvr03012
]
Eukaryotic type
Elongation factors
CIB50_0002371 (selB)
Prokaryotic type
CIB50_0002371 (selB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
WHD_3rd_SelB
Beta-barrel_SelB
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
eIF2_C
EF-G_D2
Motif
Other DBs
NCBI-ProteinID:
QMS57624
UniProt:
A0A7D7L3V7
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All DBs
Position
complement(2716396..2718186)
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AA seq
596 aa
AA seq
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MYVVATAGHVDHGKSTLVRALTGIEPDRWDEEKQRGLTIDLGFAWTELPSGRHVAFVDVP
GHERFLGNMLAGVGPAPVVCFVVAADEGWQAQSGDHRDAVAALGICDGLIVVTKADRAPE
RVADVVAQTRAELAGTGLAEAPAVVVSAQDGTGLDEFRAALDAVLARVPAPDPEARVRLW
IDRAFTISGAGTVVTGTLTAGTLRVGDRMVLRGAAGEQEVTVRSLQSQNTSVQEIGPTNR
VAVNLRGTSKEAIHRGDTLLTPRSWPVTDVLEVRRERGAPFTEVPEQVVVHAGTAGVGAR
LRPLDAEHARLQLAHPLTLVPGDRLVLRSPGARVAVGGARVLDVDPPALERRGAASREAA
RLAEIPDNGDPMAETVKHGAVSAARLRLLGLPVEAAPAGAPVLVTDGWWIHTARLDRWAR
ELRDAVAALHEREPLAPGLSRGAAATALGEPATHVLPAVVARAGLEEREGYLAVPGDGGG
LGAAETAVAALEDRLRATPFAAPEAYELDDLGLGSRELAAAQRLGRLLRLPGDVVLLPTA
PALAMRELARLPQPFTTSQARQAWGTTRRVAIPLLEHLDAKGWTRREDGSNRGIVR
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtggtggcaaccgccggtcacgtggaccacggcaagagcacgctcgtgcgggca
ctcacgggcatcgaaccggaccgctgggacgaggagaagcagcgcgggctcacgatcgac
ctcggcttcgcgtggacggagctgccctccgggcggcacgtggcgttcgtggacgtcccc
gggcacgagcgcttcctcggcaacatgctcgccggggtggggccggcccccgtggtgtgc
ttcgtggtggccgcggacgaggggtggcaggcccagtccggcgaccaccgggacgccgtc
gcggccctgggcatctgcgacgggctgatcgtggtgaccaaggcggaccgcgctccggaa
cgggtggccgacgtcgtggcccagacccgcgcggaactggcgggaacgggactcgccgag
gcgcccgccgtcgtcgtctctgcgcaggacggcacggggctcgacgagttccgcgccgcg
ctcgacgccgtgctggcccgcgttcccgcgccggacccggaggcgcgcgtgcggctgtgg
atcgacagggcgttcaccatctcgggggccgggaccgtggtcacggggacgctcacggcg
ggcaccctgcgcgtgggggaccgcatggtgctgcgcggagccgcgggggagcaggaggtc
acggtgcgctcgctgcagagtcagaacacgtccgtgcaggagatcgggcccacgaaccgc
gtggccgtgaacctgcgcggcacgagcaaggaggcgatccaccgcggagacacgctgctg
accccgcggtcctggccggtcaccgacgtcctggaggtgcgtcgggaacgcggggcgccc
ttcacggaggtcccggagcaggtggtggtgcacgccggaacggccggggtgggcgcgcgg
ctgcgaccgctggacgcggagcacgcccgcctgcagctcgcccacccgttgacgctcgtg
ccgggggaccggctggtgctgcgcagcccgggcgcgcgcgtggcggtcggcggtgcgcgc
gtgctggacgtggatcccccggcactggagcgccgcggcgccgcgtcccgggaggcggcc
cggctcgcggagatccccgacaacggggaccccatggccgagacggtcaagcacggtgcg
gtctccgccgcccggctgcggctgctcggactgcccgtcgaggccgctcccgccggtgcg
cccgtgctggtcacggacggctggtggatccacaccgcgcgcctggaccggtgggcccgc
gagctgcgcgacgccgtggccgccctgcacgagcgggagcccctggccccgggactgtcg
cgcggtgccgcggccaccgcactgggcgagccggccacccacgtgctgcccgccgtcgtc
gcccgggccggtctggaggaacgcgaggggtacctcgcggtgcccggtgacggcggggga
ctgggggcggccgagacggctgtggccgcgctcgaggacaggctgcgcgccacccccttc
gcggcgccggaggcctacgagctcgacgacctgggactgggatcccgcgaactggccgcg
gcgcagcggctcggccggctgctgaggctgccgggcgacgtcgtcctgctgcccacggcc
cccgcgctcgccatgcgcgagctcgcgcgcctgccgcagccgttcaccacgagccaggcc
cgccaggcgtggggcaccacgcgcagggtcgccatccccttgctcgaacacctcgacgcg
aagggctggacgcgccgcgaggacggcagcaaccgcggcatcgtgcgctga
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