Kocuria varians: CIB50_0002410
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Entry
CIB50_0002410 CDS
T06882
Symbol
frdA
Name
(GenBank) Fumarate reductase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
kvr
Kocuria varians
Pathway
kvr00020
Citrate cycle (TCA cycle)
kvr00190
Oxidative phosphorylation
kvr00650
Butanoate metabolism
kvr00720
Other carbon fixation pathways
kvr01100
Metabolic pathways
kvr01110
Biosynthesis of secondary metabolites
kvr01120
Microbial metabolism in diverse environments
kvr01200
Carbon metabolism
Module
kvr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
kvr_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
kvr_M00149
Succinate dehydrogenase, prokaryotes
kvr_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
kvr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CIB50_0002410 (frdA)
00650 Butanoate metabolism
CIB50_0002410 (frdA)
09102 Energy metabolism
00190 Oxidative phosphorylation
CIB50_0002410 (frdA)
00720 Other carbon fixation pathways
CIB50_0002410 (frdA)
Enzymes [BR:
kvr01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
CIB50_0002410 (frdA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
GIDA
HI0933_like
Pyr_redox_2
AlaDh_PNT_C
Pyr_redox
NAD_binding_8
ImpA_N
Motif
Other DBs
NCBI-ProteinID:
QMS57662
UniProt:
A0A7D7Q4W5
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All DBs
Position
2757553..2759550
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AA seq
665 aa
AA seq
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MTASSTTQPQALLDELRTVGSGLPGLHTDVPPSETWADRRLHYKLVSPLNRRKFTVIVVG
TGLAGAGAAAALGELGYNVEAFTFHDAPRRAHSVAAQGGINAARARKVDNDSIARFVKDT
VKGGDFRGREADAWRLAEESIRVIDHMNAIGAPFAREYGGQLATRSFGGVQVSRTYYTRG
QTGQQLQIAAAQALLRQVSTGQVNLHTRTEMLDLIVADGRAQGVVVRDLVTGEISAVTGD
AVVLATGGYGNVYYRSTLAKNSNVTAAFRAHRRGALFANPCFIQFHPTALPVSSEWQSKT
TLMSESLRNDGRIWVPVKPGDTRPPNDIPEDERDYYLERRYPAFGNLTPRDVASRAARTE
IDAGRGVGPLKNSVYLDFRDAIERLGKKVIAERYGNLFEMYSDATGEDPYEQPMRIAPGA
HFAMGGLWSDYDMMTSVPGLFVGGEAGWGYHGANRLGANSLLSACVDGWFTLPYSVPNYL
APLLGKPKLAADDDVVRAAVAEAEAGVQALLDIHGTQGPERFHRRLGDLLYATCGVTRSA
QGLAEGLEGIRALREEFWTDLRVQGRPDGFNQELERAGRVADYLDMAELMCLDALDRDES
CGAHFREEHQTEGGEAQRDDAHWLFASAWERAASGDDDAAAGPRYVRHQEHLQFPSVPPE
TRDYR
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgacagcatcctcgaccacccagccgcaggccctgctggacgagctgcgcaccgtgggc
tcgggccttcccgggctccacacggacgtgcccccgtccgagacgtgggcggaccggcgg
ctgcactacaagctggtctcccccttgaaccgccgcaagttcacggtgatcgtggtcggc
acgggtctcgccggggccggagccgccgcggcgctcggggaactcggctacaacgtggag
gcgttcaccttccacgacgccccgcggcgcgcacactccgtggcggcccagggcggcatc
aacgccgcgcgggcccggaaggtggacaacgactccatcgcccggttcgtgaaggacacc
gtcaagggcggtgacttccggggccgtgaggcggacgcctggcggctggccgaggagagc
atccgggtcatcgaccacatgaacgcgatcggtgcgcccttcgcccgcgagtacggcggt
cagctggccacccgctccttcggcggcgtgcaggtctcccgcacctactacacgcgcggg
cagaccgggcagcagctgcagatcgcggcggcccaggcgctgctgcgccaggtctccacc
ggtcaggtgaacctgcacacgcgcacggagatgctggacctgatcgtggcggacggccgc
gcccagggcgtcgtcgtccgtgacctggtgaccggcgagatctccgccgtgaccggggac
gccgtggtgctggccacgggcgggtacggcaacgtctactaccgctccacgctggccaag
aactccaacgtgaccgccgcgttccgggcgcaccgccgcggcgcgctgttcgccaacccg
tgcttcatccagttccaccccacggcgctgccggtgtcgagcgagtggcagtcgaagacc
acgctgatgagcgagtccctgcgcaacgacggccggatctgggtcccggtgaagcccggg
gacacgcgcccgcccaacgacatccccgaggacgagcgcgactactacctggagcgccgc
tacccggccttcggcaacctcacgccccgcgacgtcgccagccgggcggcgaggaccgag
atcgacgcgggccgcggcgtcgggcccctgaagaactccgtgtacctggacttccgggac
gcgatcgagcggctcgggaagaaggtgattgccgagcgctacggcaacctcttcgagatg
tactcggacgcgaccggcgaggacccgtacgagcagcccatgcgcattgcgccgggcgcg
cacttcgccatgggcgggctgtggagcgactacgacatgatgacgtcggtccccggcctg
ttcgtgggcggcgaggccggctggggctaccacggggccaaccgcctgggcgccaactcg
ctgctctccgcgtgcgtggacggctggttcacgctgccctactccgtgccgaactacctc
gctcccctgctgggcaagcccaagctcgcggccgacgacgacgtcgtgcgcgccgcggtg
gccgaggccgaagcgggcgtgcaggcactgctcgacatccacggcacccagggacccgag
cggttccaccggcgcctgggcgacctgctctacgcaacgtgcggcgtcacccgctccgcg
cagggcctcgccgagggcttggagggcatccgagcgctgcgcgaggagttctggacggac
ctgcgcgtgcaggggcgcccggacggcttcaaccaggagctcgaacgcgccggccgcgtg
gccgactacctggacatggccgagctcatgtgcctcgacgccctggaccgcgacgagtcc
tgcggcgcccacttccgggaggagcaccagaccgagggcggggaggcgcagcgcgacgac
gcgcactggctcttcgcctccgcgtgggaacgcgcggcttccggtgacgacgacgccgcg
gccgggccgcgctacgtccgccaccaggagcacctgcagttcccgagcgttcctcccgag
acccgcgactaccgatga
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