Ketogulonicigenium vulgare Y25: EIO_0361
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Entry
EIO_0361 CDS
T01338
Name
(GenBank) phage SPO1 DNA polymerase-related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
kvu
Ketogulonicigenium vulgare Y25
Pathway
kvu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kvu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EIO_0361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kvu03400
]
EIO_0361
Enzymes [BR:
kvu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
EIO_0361
DNA repair and recombination proteins [BR:
kvu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EIO_0361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
NADH_4Fe-4S
Motif
Other DBs
NCBI-ProteinID:
ADO41534
LinkDB
All DBs
Position
complement(331889..332680)
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AA seq
263 aa
AA seq
DB search
MDTAPDFYATREMLAWLVEMGADEAIADQPVDRYALPGESPKIAAPAPIAAPEKPKAARL
GPLPEVDAPAEAAALAASAQNLEQLASVMEGFDLCALKQGARSFVFSDGDPAARVMIVGE
APGREEDRAGRPFVGRAGQLLDRMFGAIGLSRSAPMADQAVYIANVLPWRPPENRTPSDT
EIAMMLPFLQRHIELADPEYLVLMGNTPCKALLGQAGILRLRGNWAEVTGRPALPMTHPA
YLLREPGAKREAWADLLSLKARL
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggatactgcccctgatttttacgcgacgcgcgagatgctggcctggctggtcgagatg
ggcgctgatgaggccatcgccgatcagcccgtggatcgctatgcgctgcccggtgaaagc
cccaaaatcgccgcgcccgccccgatcgccgcaccggaaaagcccaaagccgcccgtctt
ggccccctgcccgaggttgatgcccccgccgaggctgcagcgctggccgccagcgcgcaa
aacctggaacagctcgccagcgtgatggaggggttcgatctgtgcgccctcaagcaaggg
gcgcgcagtttcgtgttcagcgacggcgaccctgccgcccgcgtgatgatcgtcggcgaa
gcaccggggcgcgaggaggaccgcgcgggccgtccctttgtcgggcgcgccgggcagctt
ttggatcgtatgttcggggccatcggcctgtcgcgcagcgcgccaatggccgatcaggcg
gtctatatcgccaatgtgctgccctggcggccgccagaaaaccgcacgccatcggatact
gaaattgccatgatgctgccgtttctacagcggcatatcgaactggctgaccccgaatat
ctggtgctgatgggcaatacgccgtgcaaggcgctgctgggtcaggccggtatcttgcgc
ctgcgcggcaactgggccgaggtcacgggccgccccgccctgcccatgacccaccccgcc
tatctgctgcgcgaacccggcgccaagcgcgaggcttgggccgatctgctctcattgaaa
gcccgcctatga
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