Ketogulonicigenium vulgare Y25: EIO_0416
Help
Entry
EIO_0416 CDS
T01338
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
kvu
Ketogulonicigenium vulgare Y25
Pathway
kvu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
kvu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EIO_0416 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kvu03400
]
EIO_0416 (uvrA)
DNA repair and recombination proteins [BR:
kvu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EIO_0416 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EIO_0416 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
DUF4350
DnaJ_CXXCXGXG
RsgA_GTPase
nSTAND1
APS_kinase
AAA_21
AAA_15
HlyD_D4
Mtrc-MtrF_II-IV_dom
Motif
Other DBs
NCBI-ProteinID:
ADO41586
LinkDB
All DBs
Position
388025..390892
Genome browser
AA seq
955 aa
AA seq
DB search
MEQKFIEVRGAREHNLKNVSLDIPRNQLVVMTGLSGSGKSSIAFDTIYAEGQRRYVESLS
AYARQFLDMMEKPDVDHITGLSPAISIEQKTTSKNPRSTVGTVTEIYDYLRLLFARAGTP
YSPATGLPIEAQQVQDMVDRTMAMPEGTRGYLLAPVVRDRKGEYKKEMLELRKQGFQRVK
VDGEFYELDTPPTLDKKFRHDIDVVVDRIVVRAGMETRLAESFRTALNLADGIAVLETAP
SEGDPERITFSEKFACPVSGFTIPEIEPRLFSFNTPLGACPDCDGLGVELFFDERLIVPD
LTLSLLKGAVAPWGKTKSPFWLQTIEGLAKHYAFDAKTPWKDLPESVKQVVLHGSGTEEL
AFRYDDGGRSYNVTRTFEGVVPNLQRRYRETDSNWSREDMEQYQNNRPCQTCGGYRLRPE
ALAVRVGDMHVGQVVAQSVKEAYAWVQTVPEALSQQKGQIAVAIIKEIRERLGFLNNVGL
EYLTLSRASGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNDRLLDALRNLR
DQGNTVLVVEHDEDAIRTADYVFDVGPGAGVHGGQIVSQGTPAQIEADPNSLTGQYLSGQ
RRISVPQKRRKGTGKKLTVVKASGNNLHDVTVDFPLGKFVCVTGVSGGGKSTLTIETLYK
NAAMKLNGAREVPAPCETIKGFEHLDKVIDIDQRAIGRTPRSNPATYTGAFDQIRQWFAG
LPEAKARGYGPGRFSFNVKGGRCEACQGDGLLKIEMHFLADVYVTCETCHGARYNRETLE
VKFKDKSIANVLDMTIEEAADFFSAVPPIRDKMNALCHVGLGYVKVGQQATTLSGGEAQR
VKLAKELSRRSTGRTLYILDEPTTGLHFEDVRKLLDVLHELVDQGNTVVVIEHNLDVVKT
ADWVIDIGPEGGTGGGYIVATGTPEQVAEVAESHTGHYLKPLLERGHALEAGHVA
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atggaacagaagttcatcgaagtgcgcggcgcgcgcgagcataatctgaagaatgtgtca
ctggatatcccccgcaatcagctggtggtgatgacgggcctgtcgggatcggggaaatcc
tcgattgccttcgacacgatctatgccgaggggcagcgccgctatgtcgaaagcctgtcg
gcctatgcgcggcagttcctcgatatgatggaaaagccggatgtcgatcacatcacgggc
ctgtcgcccgcgatctcgattgaacagaaaaccacgtcaaagaacccgcgctcgaccgtc
gggacggtgaccgagatttacgactatctgcgcctgctgttcgcgcgcgccggcaccccc
tatagccccgcgaccggcctgccgatcgaggcgcagcaggtgcaggatatggtcgaccgc
accatggccatgcccgaggggacgcgcggctatttgctggcgcccgtcgtgcgcgaccgc
aagggcgagtataagaaagagatgctggagctgcgcaagcagggctttcagcgggtgaaa
gtggacggcgagttctatgaactcgacacgccgcccacgctggacaagaaattccgccat
gacatcgacgtggtggttgaccggattgtcgtgcgtgctggtatggagacgcggcttgcg
gaaagctttcgcacggcgttgaatctggctgatgggatcgccgtgctggaaaccgccccc
agcgagggcgacccagaacgcatcaccttttcggaaaaattcgcctgtccggtatcgggt
ttcaccatccccgagatcgagccgcgcctgttctcgttcaacacgccgctgggcgcttgt
cccgattgtgacggccttggggtcgagttgttctttgacgagcggctgatcgtgccggat
ctgaccctcagcctgctgaaaggcgcggtcgcgccatgggggaaaaccaaatcgcccttc
tggctgcagacgatcgaggggctggccaagcattacgcattcgacgccaagacgccgtgg
aaagacctgcccgagagtgtgaaacaggtcgtgctgcatggctcgggcaccgaggagctg
gccttccgatatgatgacgggggtcgcagctataacgtcactcgtacgttcgagggggtc
gtccccaacctgcagcgccgctatcgcgagaccgacagcaattggtcgcgtgaggatatg
gagcagtatcagaacaaccgtccctgccagacctgcggtggctatcgtttgcgccccgag
gcgctggccgtacgtgtgggcgatatgcatgtcgggcaggtcgtcgcgcaatcggtgaaa
gaggcctatgcttgggtgcagaccgtgcccgaggccctcagccagcaaaaaggccagatc
gccgtcgcgattatcaaggaaatccgcgaacgtctggggttcttgaacaatgtggggctg
gaatatctgacgctcagccgggcatccggcacgctatcgggcggtgaaagccagcggatc
aggctggccagtcagatcggctctggcctgacaggcgtgctttatgtgctggacgagccc
tcgattggtctgcaccagcgcgacaacgaccgcctgctggacgcgctgcgcaacctgcgt
gatcagggcaataccgtgctggtggtcgagcatgacgaggatgcgatccgcaccgctgat
tacgtctttgacgtggggccgggggcgggcgtgcatggcgggcagatcgtctcgcagggg
acacccgcgcagatcgaggctgatccgaattcgctgaccgggcaatatctgtcaggacag
cgccggatttccgtgccgcaaaagcgccgcaaaggcaccggcaaaaagctgacggtggtc
aaggccagcggcaacaacctgcatgatgtgacggttgatttcccgctgggcaaattcgtt
tgtgtgaccggcgtgtcgggcggtggtaaatccaccctgaccatcgagacgctgtataag
aacgcggcgatgaagctgaacggcgcccgcgaagtgcccgcgccgtgcgagacgatcaaa
gggttcgagcatcttgataaggtcatcgacatcgaccagcgcgccatcggccgcacgccg
cggtcgaaccccgccacttataccggcgcgtttgaccagatccgccaatggtttgccggc
ctgcccgaggcaaaggcgcgcggctatggccctggtcgtttcagctttaacgtcaagggc
ggtcgctgcgaggcctgtcagggcgacggccttttgaagatcgagatgcactttctggcc
gatgtctatgtgacctgcgagacctgccacggcgcgcgctataaccgcgaaacgctcgag
gtgaagttcaaggacaaaagcatcgccaatgtccttgatatgaccatcgaggaagcggca
gactttttcagcgcggtgccgcccatccgcgataagatgaatgcgctgtgccatgtcggc
cttggctatgtgaaagtcggccaacaagcgaccaccctgtcgggcggcgaggcgcagcgg
gtgaagctggccaaggaactttcgcgaagatccacggggcgcacgctttatatccttgat
gaaccgaccacgggtctccatttcgaggatgtgcgcaaattgctcgatgtgctgcacgag
ttggtagatcaggggaataccgtggtggtgatcgaacataaccttgatgtggtgaagacc
gcagattgggtcattgatatcgggcccgagggcggcaccggcggtggctatatcgtcgca
accggcacgcctgaacaggtggccgaggtggcggaaagccataccggccattacctaaag
ccgctgctagagcgcggccatgcactggaggcgggccatgtggcgtaa
DBGET
integrated database retrieval system
