Ketogulonicigenium vulgare Y25: EIO_1101
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Entry
EIO_1101 CDS
T01338
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
kvu
Ketogulonicigenium vulgare Y25
Pathway
kvu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kvu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EIO_1101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kvu03400
]
EIO_1101
Enzymes [BR:
kvu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
EIO_1101
DNA repair and recombination proteins [BR:
kvu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EIO_1101
Prokaryotic type
EIO_1101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ADO42248
LinkDB
All DBs
Position
complement(1063227..1063892)
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AA seq
221 aa
AA seq
DB search
MTDLPQNGWRDLAFFTADWPRIQTVLAAETRQILPPAPQRFAALNLTAPDDVRVVILGQD
PYPTPGDAMGLAFSVARGQALPRSLRNIYTEMRDDIGAAPVDGDLTHWAAQGVLLLNTAL
SVPAGSAGGHAKLGWDRLTAEVIQRVSTRPTAFILWGNHAQGYAQYIAPADHLIIRSAHP
SPLSARRGFFGSRPFSQVNEWLQARGNARICWQGNDRGLLL
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgacggatctaccgcagaacggctggcgcgatctggcctttttcaccgcagactggccc
cgtatccagacggttctggccgccgagacgcgccagatcctgccgcccgcaccgcagcgc
tttgcggcgctgaacttgaccgcgcctgatgatgtgcgcgtggtgatactgggtcaggac
ccctatccgacgccgggcgatgcgatgggccttgcgttctcggtcgcgcgcggacaggcg
ctgccgcgctctttgcgcaatatctataccgagatgcgggacgatatcggggcggcgcct
gtggatggcgatctgacccattgggccgcgcagggcgtgctgttgctgaataccgccttg
tccgtgcctgcgggcagcgcgggcggacatgcaaagctgggttgggaccgcctgaccgcc
gaggtgatacagcgcgtcagcacacgccccaccgcgtttatcctgtggggcaatcacgcg
cagggctatgcccaatatattgcgcccgcagaccacctgatcatccgcagcgcgcatccc
tcgccgctgtctgcgcggcgcggcttctttggctcgcgcccgttctcgcaggtgaatgaa
tggttgcaggcgcgcgggaacgcgcgcatctgttggcaagggaatgatagggggctgctg
ctatga
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