Ketogulonicigenium vulgare Y25: EIO_1283
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Entry
EIO_1283 CDS
T01338
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
kvu
Ketogulonicigenium vulgare Y25
Brite
KEGG Orthology (KO) [BR:
kvu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kvu03016
]
EIO_1283 (rnd)
Enzymes [BR:
kvu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
EIO_1283 (rnd)
Transfer RNA biogenesis [BR:
kvu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
EIO_1283 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
ADO42424
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All DBs
Position
1226588..1227754
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AA seq
388 aa
AA seq
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MKTITTTEALASFCAEAAKHPYVTVDTEFLRERTYYAKLCLVQLAFSGPDADAALVDPLA
DGIDLKPLYDLFLNPAVVKVFHAARQDLEIFSVGQNVIPAPLFDTQVAAMVCGYGEQVSY
ETLARKIAKADIDKTSRFTDWSRRPLSEAQKEYALADVTHLRQIYENLSAQIAKSGRAAW
VAEEMGVLNDPDTYRVDPEQAWLRVKTRTSSAKFLAVMKELARFREEYAQAQDVPRSRVY
KDDAMLELASLKPATEDDLGTARLLLREARRGPIADGILAAVKRALALRPDQMPRLAVEK
DSALQVNPALADLLRVLLKARSEAEGVAQKLIASSHDLDAIAAGQRDVAALSGWRQELFG
DDALALCEGKIALAAKGQNVVTIRLSEA
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaatcacgacgaccgaagcgctggccagcttttgtgctgaagcggccaaacat
ccctatgtgacggtcgacaccgagttcctgcgcgaacgcacctattacgcgaaactctgc
cttgtgcagttggccttttccggccctgatgcggatgccgcgctggttgatccgctggcc
gatgggatcgacctgaagcccctatatgatctgttcctgaaccccgccgtggtcaaagtg
ttccatgccgcgcggcaggatctggaaattttctcggtcgggcagaacgttattccggcg
cctttgttcgacacgcaggtcgctgcgatggtctgcggctatggcgagcaggtcagctat
gagacgttggcgcgcaaaattgccaaggccgatatcgacaagacttcgcgttttaccgat
tggtcgcgccgtccgctgtccgaggcgcaaaaagaatatgcgctggccgatgtgacgcat
ctgcgccagatctatgaaaatctgtcggcgcaaatcgccaaatccggtcgcgccgcttgg
gtggccgaggaaatgggcgtgttgaacgaccctgatacctatcgtgtcgaccccgaacag
gcctggctgcgggtgaaaacgcgcacatcatccgcaaaatttctggcggtgatgaaagaa
ctcgcgcgctttcgcgaggaatatgcgcaggcgcaggatgtgccgcgttcgcgcgtctat
aaagatgacgcgatgctggagctcgcctcgctaaagcccgcgaccgaggatgatctgggc
acggcgcgcctgctgctgcgcgaggcgcgccgtggcccgatcgcggatggtattttggcg
gcggtcaagcgcgctttggcgctgcgccccgatcagatgccgcgccttgcggtcgaaaaa
gacagcgccttgcaggtcaatccggcgctcgccgatctgctgcgcgtgctgttgaaagcc
cggtccgaggccgaaggggtggcgcaaaaactgatcgcctcctcgcatgatctggatgca
attgcggcggggcagcgcgatgtcgcggccctgtccggctggcggcaagagttgtttggc
gatgacgcgctggccctgtgcgagggcaagatcgctttggccgccaaggggcaaaatgtc
gtcacgatccgcctgagcgaggcgtga
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