Ketogulonicigenium vulgare Y25: EIO_2463
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Entry
EIO_2463 CDS
T01338
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
kvu
Ketogulonicigenium vulgare Y25
Pathway
kvu03410
Base excision repair
kvu03430
Mismatch repair
kvu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kvu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EIO_2463
03430 Mismatch repair
EIO_2463
03440 Homologous recombination
EIO_2463
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kvu03400
]
EIO_2463
DNA repair and recombination proteins [BR:
kvu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
EIO_2463
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
EIO_2463
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
EIO_2463
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ADO43548
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All DBs
Position
2387566..2389311
Genome browser
AA seq
581 aa
AA seq
DB search
MSFLGVTDSVTGRAWVGPDLETDRLTEALSQQLGLSRPLAALLAQRGIDADGAEGFLTPR
LRDLMPDPRSLRDMEKAAARLVLAVQTRQRIAIFGDYDVDGGASSALLIDWLRNFGLQAT
LYIPDRIDEGYGPNVPAMADLAARHDLIICVDCGTLSHEALGAATAADVIVLDHHLGGET
LPPALAVVNPNRQDESGDLTYLCAAGVVFLALVEANRQLRAGGLQGPDLTSLLDLVALAT
VADVAPLVGLNRALVRQGLAVMGRRARPGLVALADVARIDSAPSSYHLGYILGPRVNAGG
RIGRADLGARLLATTDPHEAAAMAAQLDALNTERRAIESAVRDAAIAQAEARGLEAPLVW
AASEGWHPGVVGIVAARIKEATNRPSVVIGFDGGIGKGSGRSVSGVDLGAAIQRVAAEGL
LLKGGGHKMAAGLTVTRENLEPAMARLSELLARQGAGAGGPSDLRIDALLMPGAATVAMI
EQLEQAGPFGASAPAPRFALPDVVVQYVKPVGSDHLKVTLGDGLGARLDAIAFNAAQSPL
GHLLTHSGSQRVHVVGRLEVNHWQGRASAQLRIEDAAKASS
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
gtgtcttttctaggcgttacagactctgtcacgggccgcgcttgggtcggccccgatcta
gaaaccgaccgcctgaccgaggctttgtcccagcaactcgggctttcgcgccccttggcc
gcgctgctggcgcagcgcggcattgacgccgacggggccgagggctttctgaccccgcgc
ctgcgcgatctgatgcccgacccgcgcagcctgcgggatatggaaaaggcagcggcgcgg
ctggtgctggccgtgcagacacggcaacgcattgcgatctttggcgattacgatgtggat
ggcggcgcctcatccgcgctgctgatcgattggctgcgcaactttggtctgcaggcgacc
ctatatatccccgaccgcattgacgagggctatggccccaatgttccggccatggcggat
ctggcggcgcgccacgacctgatcatctgcgtcgattgcggcaccctctcgcacgaggct
ttgggcgcggccacagccgccgatgtcatcgtactggaccaccacctaggcggcgagacc
ctgccccctgccctggccgtggtgaacccgaaccggcaggacgaaagcggcgatctgacc
tatctctgcgcggcgggcgtcgtctttttggcgctggtcgaggcgaaccgccagttgcgc
gcgggcgggctgcaagggcctgatctgaccagccttctggatctggtcgcgctggcaacg
gtcgccgatgtggcgccgctggttggcctgaaccgtgcattggtgcggcaggggctggcg
gtcatgggccgccgcgcgcgtccgggccttgtggctttggccgatgtggcgcggatcgac
agcgcccccagcagctatcaccttggctatatccttggcccgcgtgtgaacgcgggcggc
cgtattggccgcgcggaccttggtgcgcggctgctggccaccaccgacccgcatgaggct
gccgccatggccgcgcagcttgatgcgctgaacaccgagcggcgggcgattgaatccgct
gtccgcgacgccgccatcgcgcaggccgaggcccgcggcctcgaggcaccgctggtctgg
gccgcaagcgagggctggcaccccggtgtcgtcggcattgtcgccgcccgtatcaaagag
gcgacgaaccgcccgagcgtggtgatcggctttgacggcgggatcggcaaaggctcgggc
cgctctgtcagcggcgttgaccttggcgctgcgatccaacgcgttgcggctgagggcctg
ctgctgaaaggcggcggccataagatggcggcgggcctgacggtcacgcgcgagaattta
gagcctgccatggcacgcctgtcggaactgctggcccgtcagggcgcaggcgcaggtggc
cccagtgatttgcgcattgatgcgctgctgatgcccggcgcggcgacggtcgccatgatc
gaacagttggaacaggccgggccgttcggcgcctcggcccccgcgccacgctttgcgctg
cccgatgtcgtggtgcaatatgtcaaacccgtcggcagcgaccacctgaaggtcacattg
ggcgatggccttggcgcgcggcttgatgcgatcgcctttaatgccgcgcaatcgccgctg
ggacatctgctgacccattccggcagccagcgcgtgcatgtggtcggacggcttgaggtg
aaccactggcagggccgtgccagcgcccaattgcgcatcgaggatgccgcaaaggcaagc
agctga
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