Ketogulonicigenium vulgare Y25: EIO_2572
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Entry
EIO_2572 CDS
T01338
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
kvu
Ketogulonicigenium vulgare Y25
Pathway
kvu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kvu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EIO_2572
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kvu03021
]
EIO_2572
03400 DNA repair and recombination proteins [BR:
kvu03400
]
EIO_2572
Enzymes [BR:
kvu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EIO_2572
Transcription machinery [BR:
kvu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EIO_2572
DNA repair and recombination proteins [BR:
kvu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EIO_2572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
ADO43650
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Position
complement(2484667..2485683)
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AA seq
338 aa
AA seq
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MIHRNWSELIKPTQLDVRPGADAARQATIVAEPLERGFGLTLGNALRRILLSSLQGAAIT
AVQIDNVLHEFSSITGVREDVTDIVLNLKGVAIRMDVEGPRRVSIQVKGPAVVTAGDISE
SNGIEILNKDHVICHLDDGASLYMELTVNTGKGYVAADRNKPEDAPIGLIAIDALYSPVK
KVSYDVQPTREGQVLDYDRLTMKIETNGGLSPEDAVAYAARILQDQLSIFVNFDEPESAL
GGAADDGLEFNPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSGMGLHLGMDVEEWPPENIEELAKKYEDQF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatccacaggaattggtccgagcttatcaagccgacccaactcgatgttcgcccgggt
gccgatgcggcccgtcaagcgaccatcgttgccgagccgctagagcgtggcttcggtctg
acgctgggcaatgcgctgcgccgcatcctgctgtcgtcgctgcaaggtgccgctattacg
gccgtgcagatcgacaacgtcttgcatgaattctcctcgatcactggcgtgcgcgaggat
gtgactgatatcgttctgaacctgaagggcgtcgccatccgcatggatgtcgaaggtccg
cgtcgtgtgtcgatccaggtcaaaggcccggctgtcgtcacggctggcgacatcagcgaa
tcgaacgggatcgagatcctgaacaaggaccatgtgatctgccacctggatgatggtgcg
tcgctgtacatggaactgaccgtcaacaccggcaaaggctatgtcgcggctgaccgcaac
aagcccgaagatgcgcccattggcctgatcgccattgatgcgctgtattcgccggtcaag
aaggtctcgtatgacgtgcagccgacccgcgaaggtcaggtgctggattacgaccgtctg
acgatgaagatcgaaaccaatggcggcctctcgcccgaagacgcggtggcttatgctgcg
cgtattttgcaagaccagctgtcgatcttcgtgaacttcgacgagcctgaatcggctctg
ggcggcgcggcggatgacggccttgaattcaacccgcttctgctgaagaaggttgacgag
ctggagctgtcggtccgttcggcaaactgcctgaagaacgacaatatcgtctacattggc
gacctgatccaaaaaaccgaagccgagatgctccgcaccccgaacttcggccgcaagtcg
ctgaacgagatcaaagaagtgctttcgggcatgggtctgcaccttggcatggatgtcgag
gaatggccgccggaaaacattgaagagctggccaagaaatacgaagaccagttctaa
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