Ketogulonicigenium vulgare Y25: EIO_2848
Help
Entry
EIO_2848 CDS
T01338
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
kvu
Ketogulonicigenium vulgare Y25
Pathway
kvu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kvu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EIO_2848
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kvu03019
]
EIO_2848
03016 Transfer RNA biogenesis [BR:
kvu03016
]
EIO_2848
Enzymes [BR:
kvu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
EIO_2848
Messenger RNA biogenesis [BR:
kvu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EIO_2848
Transfer RNA biogenesis [BR:
kvu03016
]
Prokaryotic type
tRNA degradation factors
EIO_2848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
KH-I_KHDC4-BBP
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
ADO43919
LinkDB
All DBs
Position
2752461..2754602
Genome browser
AA seq
713 aa
AA seq
DB search
MFNQIKKSIQWGDETLTLETGKIARQADGSVIATLGETSVMANVTFAKAPKPGQDFFPLT
VHYQEKYYAAGKIPGGFFKREARPTERETLISRLIDRPCRPLFVEGFKHEVLVMATVLSH
DLVNDPDIVAMIAASAALTISGVPFMGPIGAARVGYSNGAYTLNPAIDELHDIRNKSEQR
LDLVVAGTKDAVMMVESEAYELSEDEILGAVVFAHEQMQPVIDLIIDLAEDAAKEPFDFQ
PADTSALLAAVTALGGEDMRAAFAIRTKQDRVAAIDAAVAKIKAGLTEEQLADSSLGAVI
KQLESDVLRSDIVKHGRRIDGRSLDEVRPIVSETGLLPRAHGSALFTRGETQGLVVTTLG
TGDDEQFIDALHGNFKSNFLLHYNFPPYSVGEVGRVGSPGRREIGHGKLAWRALQAVLPA
NTDFPYTIRVVSEITESNGSSSMASVCGGSLSMLDAGVPLKAPVAGVAMGLVLEKDGSWA
VLTDILGDEDHLGDMDFKVAGTEAGITSLQMDIKVAGITPEIMRKALAQARTGRLHILGE
MAKSLTTANAFSAHAPRIETMQIPTDKIREVIGSGGKVIREIVETSGAKVDINDDGTIKI
ASSNGEAIKKAYDMIWSIVAEPEINGIYKGTVVKLVDFGAFVNFFGKRDGLVHVSQIENR
RLNHPSDVLKEGQEVWVKLLGFDDRGKVRLSMKIVDQATGEEIAKEETSEASE
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatcaaatcaagaaatccatccagtggggggacgagaccctcaccctggaaact
ggcaagattgcccgccaggcggatggttccgtgattgcaacgctgggtgaaaccagcgtc
atggcaaacgtgacctttgccaaggctcccaagcccggtcaggactttttcccgctgacc
gtccactaccaagagaaatactatgccgccggtaaaattccgggcggcttcttcaaacgc
gaggcccgcccgaccgagcgcgaaaccctgatttcgcgcctgatcgaccgtccgtgccgc
ccgctgttcgtcgaaggtttcaaacacgaagttctggtcatggccaccgtgctgtcgcac
gatctggtcaacgaccccgatatcgttgcgatgattgcagcctcggctgcgctgaccatt
tcgggcgtccccttcatgggcccgatcggtgcggcacgcgtcggttattcgaacggcgcc
tatacgctgaaccccgccatcgacgagctgcacgacatccgcaataaatcggagcagcgt
ctggacctggtcgtcgccggcaccaaagacgccgtgatgatggtcgaatccgaagcctat
gagctgtcggaagacgagatcctgggcgccgttgtttttgcacatgagcaaatgcagccg
gtcatcgacctgatcatcgatctggccgaagacgccgccaaagagcccttcgacttccaa
ccggctgacacttcggccctgctggcggctgtcaccgcgctgggcggcgaagacatgcgc
gccgctttcgcgatccgcaccaagcaagaccgcgtcgccgcgatcgacgccgccgtcgcc
aagatcaaagctggcctgaccgaagaacagctggctgacagcagcctcggcgctgtgatc
aagcagttggaatccgacgttctgcgcagcgacatcgtcaagcatggccgccgtatcgac
ggtcgcagtctggacgaagtgcgcccgatcgtgtcggaaaccggcctgctgccgcgcgcg
catggctcggcgctgttcacccgcggcgagacccaaggtctggtcgtcaccacgctgggt
accggcgatgacgagcagttcatcgacgcgctgcacggcaacttcaaatcgaacttcctg
ctgcactataacttcccgccctactcggtcggcgaagtgggtcgcgtaggctcgcccggt
cgccgcgaaatcggccacggcaagctggcatggcgcgcgctgcaggctgttctgccggcc
aacaccgacttcccctacacgatccgcgtcgtgtccgagatcaccgaatcgaacggttcg
tcctcgatggcgtcggtttgcggtggctcgctgtcgatgctggacgcaggcgtcccgctg
aaggcaccggttgctggcgtggccatgggcctggtgctggaaaaagacggctcgtgggct
gttttgaccgacattctgggtgacgaagaccacctgggcgatatggacttcaaagtggcg
ggtaccgaagctggtatcacctcgctgcagatggacatcaaagtcgcgggcatcacgccc
gagatcatgcgcaaagcactggcgcaggcccgcaccggtcgcctgcacatcctgggcgaa
atggcgaaatcgctgaccaccgcgaacgctttctcggcccatgcgccgcggatcgagacg
atgcagatcccgaccgacaagatccgtgaagtgatcggctcgggcggcaaggtcatccgc
gagatcgtggaaacctcgggcgccaaggtcgacatcaacgacgacggcacgatcaaaatc
gcatcctcgaacggcgaagcgatcaagaaggcctatgacatgatctggtcgatcgtggca
gagccggaaatcaacggcatctacaaaggcaccgttgtcaaactggtcgatttcggcgct
ttcgtgaacttctttggcaagcgcgatggtctggtgcacgtcagccagatcgaaaaccgc
cgcctgaaccatccctcggatgtgctgaaagaaggccaagaggtctgggtcaagctgctg
ggctttgacgatcgcggcaaggtgcgcctgtcgatgaagatcgtcgatcaagccaccggc
gaagaaatcgccaaagaagagacgtccgaagccagcgaataa
DBGET
integrated database retrieval system
