Kyrpidia spormannii: CVV65_01730
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Entry
CVV65_01730 CDS
T05215
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
kyr
Kyrpidia spormannii
Pathway
kyr00521
Streptomycin biosynthesis
kyr00523
Polyketide sugar unit biosynthesis
kyr00525
Acarbose and validamycin biosynthesis
kyr00541
Biosynthesis of various nucleotide sugars
kyr01100
Metabolic pathways
kyr01110
Biosynthesis of secondary metabolites
kyr01250
Biosynthesis of nucleotide sugars
Module
kyr_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
kyr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CVV65_01730 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CVV65_01730 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
CVV65_01730 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CVV65_01730 (rfbB)
00525 Acarbose and validamycin biosynthesis
CVV65_01730 (rfbB)
Enzymes [BR:
kyr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CVV65_01730 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
NAD_binding_10
NmrA
Motif
Other DBs
NCBI-ProteinID:
ATY83846
UniProt:
A0A2K8N2Y9
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Position
322555..323577
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AA seq
340 aa
AA seq
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MKLLVTGGAGFIGSNFVHYMLNEHPTYRIVTVDALTYAGNLENLKNVEDDPRHQFVKGDI
CDRLLVFDLVSDGFDVIVNFAAESHVDRSILDASPFVRTNVLGTQVLLDAVREFGVSKYI
QVSTDEVYGSLNGDGYFTEDTPLSPNSPYSASKASADLLVRAAHHTYGIDVNITRCSNNY
GPFQFPEKLIPLTISNALENRSIPVYGDGQQVRDWLHVLDHCRAIDQVIHHGRPGEVYNI
GGHNERTNLEVVKRILSLLNKPESLIQHVQDRPGHDRRYAIDATKIRRELGWAPQYGFEE
GLRQTIQWYLDHQEWLQRVKSKDYMRYYERQYSRRMGFVG
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaaactattggtaaccggaggagccgggtttattggcagtaacttcgttcattatatg
ttgaatgagcaccccacctatcgaatcgtcaccgtggatgcattgacctacgcggggaac
cttgaaaatctaaaaaacgtcgaggatgatccgcgccaccagtttgtgaagggcgacata
tgtgacaggttgcttgtattcgatttggtttccgacgggtttgatgtcatagtcaacttt
gcagcggaatcccatgtcgatcgaagcattcttgatgcctctccctttgtccgtaccaac
gtcttgggtacacaagttttgctcgatgccgttcgggagtttggggtttccaaatatatt
caggtgtctaccgatgaggtatatggcagtctcaacggcgacggctatttcactgaagat
acgcctttgtccccaaacagtccctattcggcgagcaaagcgagtgcggatttactcgtc
cgcgccgctcatcatacatatgggatcgatgtcaacatcacccgttgctcgaacaattac
ggaccattccagtttccagagaaactcattccccttacaatttccaatgccttggaaaat
cgttcgataccggtgtacggcgatggacaacaggtgagagattggctgcatgtactggat
cactgtcgggcgattgatcaggtcatccaccacggtcgtcccggggaggtttacaacatc
gggggacataacgagaggacgaaccttgaggttgtcaaacggattctgagcctgttgaac
aagccggaatcactgatccaacatgtgcaggacaggccgggccacgaccgcaggtacgcc
atcgacgcgacgaaaattcgcagggaattgggttgggctccccaatatgggttcgaagaa
gggttacggcagaccattcaatggtacttggaccaccaagagtggctgcaaagggtaaag
tcaaaagactatatgcgctactatgaacggcaatacagcaggcgaatggggtttgtagga
tga
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