Kyrpidia spormannii: CVV65_08400
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Entry
CVV65_08400 CDS
T05215
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
kyr
Kyrpidia spormannii
Pathway
kyr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CVV65_08400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kyr03019
]
CVV65_08400
03009 Ribosome biogenesis [BR:
kyr03009
]
CVV65_08400
Enzymes [BR:
kyr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CVV65_08400
Messenger RNA biogenesis [BR:
kyr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CVV65_08400
Ribosome biogenesis [BR:
kyr03009
]
Prokaryotic type
rRNA helicases
CVV65_08400
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
ATY84941
UniProt:
A0A2K8N6F2
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All DBs
Position
complement(1643595..1645175)
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AA seq
526 aa
AA seq
DB search
MTTFTDFQLSRRVQQAIDDMGFEEPSPIQAACIPLVLQGKDVIGQAQTGTGKTAAFGVPI
IEMMGTGRHVQALILTPTRELAIQVAGELRKIAKYARVRTLPIYGGQSIGHQIRALQQGV
GVVIGTPGRVLDHLRRGTLKLDKVRTVVLDEADEMLDMGFIEDIEAILKETPQERQTLLF
SATFPHEVKQLAVRYMKNPEHVTVNRGEMTVPLIDQIYYKVLERNKLESLCRIIDSEDVS
LGIIFCRTKRGVDELTEALLSRGYLVDGLHGDLSQAQRDRVMKKFRNGDIEFLVATDVAA
RGIDVTNVTHVINYDIPQDPESYVHRIGRTGRAGRRGLAITLVTPREFKLLKQIERETKA
PLVGREVPTLADVAERVAENWRERLRRTVQEGGIANYRAILGSLVDEFDPVDLAAAALKL
ASADDLHTGEEEDYDFGETGASPGMVRFFLNIGRSANVGPGDLVRMISEETGIPGQAIGK
IDLYDRFAFVEVEEESAPFVFEALRQARINGLRVNLEPARPRSRRA
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgacaacatttactgattttcaattgagccgaagagtgcagcaagccattgatgatatg
ggattcgaagaaccttctccgattcaggcagcttgtattcctctggtgttgcaaggaaaa
gacgtcattggtcaagctcagacgggaacggggaaaactgcggccttcggggtgccgatt
attgagatgatgggtacgggtcggcacgttcaggccttgatcctcactcctacccgggaa
ttggcgatccaggtggccggggagttgcgcaaaatcgcgaagtatgccagagtgaggacg
ctaccgatctatggcgggcaatccattggtcaccagattcgggcgctccagcagggcgtg
ggagtggtcattggaactcccgggcgggtgttggaccatttgcgccgaggcaccttgaag
ttagacaaagtgcgcaccgtggttctggacgaagcggatgagatgttggatatggggttt
atcgaagatattgaggcgattttgaaggagacaccccaggaacgccaaacgctcttgttt
tcggccacattcccccacgaagtgaaacagttggcagtccggtacatgaaaaatccggag
cacgtgacggtcaaccggggggaaatgaccgtccccctgattgatcagatctactataaa
gtgctggaacgcaacaagctggaaagcttgtgccggatcatcgacagcgaggacgtgtcg
ctcggcatcattttttgccgcaccaagcgtggggtggatgagctgaccgaggcactgctg
tcccgggggtatctcgtcgacggacttcacggcgatttgtcccaggcccagcgggatcgg
gtgatgaaaaaattccgcaatggggatatcgagtttctggtggccacggatgtcgcggcc
cgggggatcgacgtgaccaatgtcacccacgtgattaactatgacattccccaggatcca
gaatcgtatgtgcatcggatcggccggacgggcagggccggtcggcggggactggccatt
accttggtcacgcccagggagttcaagttgctgaaacagattgagagggagaccaaagct
cccttggtggggcgggaggtccccacgttggcggatgtggcggaacgggtggctgaaaac
tggcgggagcggttgcggcgcacggtccaggagggcggaatcgccaattaccgcgccatt
ctcggctctctcgtagacgagttcgacccggtggatctggccgccgccgctttgaagctg
gccagcgccgacgatctgcacaccggtgaggaggaggactacgattttggcgagaccggg
gcatcccctggcatggtccgctttttcctgaacattggacgcagcgccaatgtgggaccc
ggggatcttgtgcggatgatttcggaggagacgggcatccccggtcaggcgatcggcaag
atcgacttgtatgatcggttcgccttcgtcgaagtggaggaggaatcggcaccctttgta
ttcgaggcgctgcgccaggcgcgcatcaatggacttcgggtgaacttggaaccggcgcgc
cctcgaagccgccgggcctga
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