Kurthia zopfii: NCTC404_00310
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Entry
NCTC404_00310 CDS
T05934
Symbol
addB
Name
(GenBank) ATP-dependent helicase/deoxyribonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
kzo
Kurthia zopfii
Brite
KEGG Orthology (KO) [BR:
kzo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kzo03400
]
NCTC404_00310 (addB)
Enzymes [BR:
kzo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC404_00310 (addB)
DNA repair and recombination proteins [BR:
kzo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
NCTC404_00310 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
AAA_22
cobW
Motif
Other DBs
NCBI-ProteinID:
VEI04954
LinkDB
All DBs
Position
1:complement(318978..322487)
Genome browser
AA seq
1169 aa
AA seq
DB search
MALTIISGRSGSGKTTYIQNEITNSLNEHSIGDPIFIIIPDQMSFSTEFQLTNTSGVGGM
IRAQATTFKRLAWRVLSEVGGISREEINGFGYRMLIRSVLLENAEQLSLFKKSAGKRGFT
EEVESILKEFSRYSLDYAKLTDLKVTLENNPDAPATLKKKMHDLQIIMNGIESKLGKTYV
DSEGYIPLLIQAVEESNLMKQSHIYIDGFNSFTTREFELVTQLIRIAKDVTIVLPFDSEM
DATEVQSLFHQPALLAQKLKDFAFQYGVEVKGTVHLAEQRRYQSNDLKYIEKSLDQYPVE
QMTEQSDGGLQIIGATTRKAEIHGIAREIRRFIQEGNRYRDIAILYRQADAYDPLITTIF
KEYEIPVFVSQKKPMLHHPLIELSRSVLEVIDRDWLYEPVFRAIKTDLFFPTGANTGVWR
ERADRLENFVIANGIYKERWFDDQRWLYKKYRGLEFYSKNQTDDERAMQAEIEAVRSVVI
EPMRVLMTALKEAQTGIEYATALFEFMETLNVYDKLDSMKTLEIEKGRLLEASEHEQAWN
GFVDVLDQFVAMFGNQEMTIREVMKILDEGFDTLEFSRIPPSVDQVTVATADLARLSNMK
AVFVIGVNDGAFPTRIEFEGMIADSEREWFSKMGHEIAPTSKERLLEEDLIIYSAFTAAS
DKLCVSYALSDEEGKSLLPSLFIKKLQDLTGVEEQIIYMTPDEALTSVDDWSYISHPRTA
IAYLMNQIRQSEHDQQPLSAEWQQLQKYYENDLTWRTTFKRLMKSVTNHNKTEDLEQNIT
DALYGKTITSSVSRVEKYFKCPFAHFATYGLKLNEREEYRLDPPTIGDLFHAALKWISDK
TTEEDLKWGQLSIEECKKLANDAVQVVVPLLYHQILLSSARYQYILRKLTMIVERTMISM
RHHARNSGFTPLAIEAAFGPNEAIPPLTIDLPNKKKMQIRGRIDRIDSTKFDDQAYLRIV
DYKSSAQKLDMNDIYHGLSLQMLTYLDVAVENADHWMDVPTEAGGVLYVHMHNPMLKEEK
ILSDSESESEILKKFKMSGLVLDSPDVILEMDESLEDIGGRSEIVPVYVKKDGTVSKGMS
SVINQEELGDLRTFVRKKHREAGEGIMDGKTTISPFKLKQKTACDYCPQKSVCQFDTTDL
NQSYRNLSVNKSDEVIDKIKKEAAHNDSN
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atggcattaacaattatttcaggtcgttcaggttcaggcaaaacgacttatatacaaaat
gaaatcacgaacagcttaaatgaacattcgattggcgatcccatcttcattattattcca
gaccaaatgtcattttctacggaatttcaattaacgaatacgagtggcgtaggtggaatg
attcgagcgcaagcaacgacatttaagcgtttagcttggcgtgtgctgtcagaagtaggc
ggcattagtcgagaggaaattaatggttttggttaccgcatgttaattagaagtgtatta
ctcgaaaatgcggagcaactatcacttttcaaaaaatcagctggaaaaagaggatttact
gaagaagttgaatcgattttaaaagaatttagccgatatagtttggattatgcaaaactg
acagatttaaaagtcactttggaaaataatccagatgcacctgcgacgttaaagaaaaaa
atgcatgatttacaaattataatgaacggaattgaaagtaaattaggcaaaacttacgtc
gatagcgaagggtatattccattactaattcaagcggttgaagaaagtaatctaatgaag
caatctcatatttacattgatggatttaattcatttacaacgagagaatttgaacttgtg
acgcagctgatccgcattgctaaagatgtgacaattgttctgccattcgactctgaaatg
gatgcgacggaagtgcaatcattattccatcaaccggcattattagcgcagaaattaaag
gattttgctttccaatatggtgtcgaagtgaaggggacagttcatttagcggagcaacgt
cgatatcaatcgaatgatttgaaatatattgagaaatcattggatcaatatcccgttgag
caaatgacggagcagtcagatggtggattacaaatcattggtgcgacaactcgaaaagcc
gaaattcatggcattgcacgagaaatccgacgatttattcaagaagggaatcgttatcga
gatattgccattttatatcgtcaagctgatgcgtatgatccattaattacgaccatcttc
aaagagtatgaaattcctgttttcgtcagtcagaaaaaaccgatgctacatcatccatta
atcgaattaagtcgttctgtcttagaagtgattgaccgtgattggttgtatgagcctgtt
tttagagcgatcaaaacagatttattcttcccgacaggagcaaatactggtgtatggcgt
gagcgagcggaccgtttagaaaactttgttattgctaatggtatttataaagagcgttgg
tttgacgatcagcgttggctttataaaaaatatcgtggtttagaattttattcgaaaaat
caaaccgatgatgaacgagcgatgcaggcagaaatagaagcagttcgttccgttgtcatc
gaaccaatgcgtgtacttatgactgcattgaaagaagcgcaaacaggtattgaatacgcg
acagctttatttgagttcatggaaacgctgaatgtatacgataagcttgattcaatgaaa
acattagaaattgaaaaaggtcgactattggaagcttccgaacatgagcaagcatggaat
ggtttcgtcgatgtattagaccaatttgtggcgatgtttggtaatcaagaaatgacaatc
cgtgaagtgatgaaaattcttgatgaaggattcgacacacttgagttttcacgaatccca
ccttcagttgaccaagtgacagtagcgacggcagacttagctcgactatccaatatgaaa
gctgtcttcgtaatcggtgtcaatgatggcgcattccctactcgaattgaattcgaagga
atgattgcggattcggaacgtgaatggttttcaaaaatgggtcatgaaattgctccaaca
tcgaaagaacgtttattagaagaagatttaattatctatagtgcatttacagcggcttct
gacaaattatgcgtttcttatgcgttgagtgatgaagaagggaagtcacttctaccgtca
ttattcattaaaaagctgcaagatttaacaggtgtagaggaacaaattatttacatgaca
ccagatgaagcgctgacttctgtcgacgattggtcatatatctcacatcctcgcacagca
attgcctatttaatgaatcaaattcgccaaagtgaacatgatcaacaaccactatcagca
gagtggcagcaacttcaaaaatattatgagaatgacctaacttggcgaacgactttcaaa
cgcttaatgaaatcagtgacgaatcataataaaacggaagacttggaacagaacattaca
gatgctttgtatgggaagacaattacttcgagtgtatcacgtgtcgaaaaatattttaaa
tgcccattcgctcattttgcgacatacggtttgaaattaaatgagcgtgaagagtatcgc
ttggatccaccaacaatcggagatctattccacgccgcattgaaatggatttcggataaa
acgacggaggaagatttgaaatggggtcaactttccattgaggaatgtaaaaagctcgca
aatgatgccgttcaagtcgtcgtaccgttgctttatcaccaaattttattaagttcggct
cgctaccaatatattttaagaaaattaacgatgatcgtggagcgcacgatgatttcaatg
cgccatcatgcacgaaattcaggcttcacacctttagcaatcgaagccgcatttggcccg
aatgaagcaattccaccattaacaatcgatttaccgaataagaagaaaatgcaaattcga
ggtcgaattgaccgcattgattcgacgaaatttgatgatcaagcatatttacgaattgtc
gattataaatcttccgcgcagaaactcgatatgaatgacatttatcatggcctatcgctt
caaatgctgacgtatttagatgttgcggtagaaaatgccgaccattggatggatgtccct
acagaagcaggtggcgtgctttacgtgcatatgcataatccaatgttaaaagaagaaaag
atcttatctgactcagaatctgaatcggaaatattgaagaaattcaaaatgagcggactc
gtattagattcacctgatgttattttagaaatggatgagtcgctggaagatatcggcggc
cgttcggaaatcgtacctgtttatgtgaaaaaggatggcaccgtatcgaaaggaatgtca
tctgtaattaatcaagaggaattaggtgaccttcgtacatttgtccgtaaaaaacaccgt
gaagctggcgaaggaattatggatggtaaaacaactattagtccatttaaattgaagcaa
aaaacagcgtgtgactattgcccacaaaaatcagtatgccaatttgatacgaccgatttg
aatcaaagttatcgaaatttaagcgtcaacaaatctgatgaagtgatcgacaaaattaaa
aaggaggcggcacataatgattccaattaa
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integrated database retrieval system
