Kurthia zopfii: NCTC404_01272
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Entry
NCTC404_01272 CDS
T05934
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase pcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
kzo
Kurthia zopfii
Pathway
kzo03420
Nucleotide excision repair
kzo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kzo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC404_01272 (pcrA)
03430 Mismatch repair
NCTC404_01272 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kzo03400
]
NCTC404_01272 (pcrA)
Enzymes [BR:
kzo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC404_01272 (pcrA)
DNA repair and recombination proteins [BR:
kzo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC404_01272 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
NCTC404_01272 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
RPN11_C
AAA_11
AAA_22
Sgo0707_N2
ChuX_HutX
ResIII
Motif
Other DBs
NCBI-ProteinID:
VEI05846
LinkDB
All DBs
Position
1:1253666..1255927
Genome browser
AA seq
753 aa
AA seq
DB search
MNQLTNNLLRGMNPQQAEAVQATEGPLLIMAGAGSGKTRVLTHRIAYLVIQKAIKPSNIL
AITFTNKAAREMRNRIDAILGNGTGDRMWVSTFHSMCVRILRRDIDRIGYNKNFSILDTT
DQLSVIKNALKELNIDPKQNDPRMLLNAISSAKNEGVSVDDYSKQVSSNNPHEQTILKVY
ENYQHRLRKNQSLDFDDLIMITIRLFKEVPEVLEYYQDRFQYIHVDEYQDTNHTQYTLVK
LLAKNHENICVVGDSDQSIYRWRGADIQNILSFSKDYPTAKTIMLEQNYRSTKTILQAAN
AVIKNNSSRFPKELRTDNQDGEKISVYRAYNEKAEAQFVVKTIQEQMLYKNRKAEDFAIL
YRTNAQSRVMEEMLVKSNMDYTIVGGTKFYDRKEIKDLLAYLRLIANNDDDLSLARIINE
PKRGIGATSFDRIAVNALEADRSIFDALAEVDFMGLPGKATNATIHFHAMIKNLTQMQEY
MSVTELVEEILEKSGYREMLKLEKTIEAQSRLENIDEFLSVTKAFEAQSEDKTLVAFLTD
LALIADIDTLGKDEEEKDKGAGVVLMTMHSAKGLEFPVVFIIGMEENIFPHSRSINDNDE
MEEERRLAYVGITRAEEQLFISCAQTRTLFGSSSFNSPSRFIQEIDSEILEEIASQSSSF
GGSSSSSTAPRRAASGVRKTTTGPNLKTTSNYKESGGEKMTWAAGDKASHKKWGVGTVVS
VRGEGEAMELDIAFPTPTGIKRLLAKFAPIDKV
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaattaacgaataacttattaagaggtatgaatccacagcaagcagaagctgtg
caagcaacagaaggaccattgctaattatggcaggagcaggttcagggaaaacacgcgta
ttaacacatagaattgcttacttagtcatccaaaaagcgattaaaccatcaaatatttta
gcgattacatttacgaataaagccgcgcgtgagatgagaaatcgtatcgatgcaatttta
ggaaatggtacgggcgaccgaatgtgggtttcgacattccactcaatgtgcgtgcgaatt
ttaagaagagatatcgatcgaattggttacaataagaacttttcaattttagatacgaca
gatcagctgtcagttattaagaatgccttaaaagaattgaatattgatccgaaacaaaat
gatccgcgcatgttattgaatgcgattagttcagctaagaacgaaggcgtttcggtagat
gattatagcaagcaagtgagcagtaataatccacatgaacaaacgattttaaaagtttat
gagaactatcaacatagactacgtaaaaaccaatcattggactttgatgatttgattatg
attacgattcgtctcttcaaagaagtgccagaagtacttgaatattatcaagatcgcttt
caatatattcatgtggatgaatatcaagatacgaaccatacacaatacactttagtgaaa
cttcttgcgaaaaatcacgaaaatatttgtgttgttggtgattcggatcaatcgatttat
cgttggcgtggagcggatattcaaaacatcctttctttctcaaaagactatccaactgcc
aaaacgattatgttagaacaaaactatcgctcgacgaagacgattttacaagctgctaat
gcggtcatcaaaaataactcaagtcgtttcccgaaagagttacgtacagataatcaagat
ggagagaaaatctcggtttatcgtgcatacaatgagaaggcggaagcgcaatttgttgtg
aagacgattcaagaacaaatgctatacaaaaaccgtaaagcagaagatttcgctattctt
taccgcacgaatgctcaatctcgtgtgatggaggaaatgctcgttaaatcaaatatggat
tatacgattgtcggcggcacgaaattctatgatcgtaaagaaatcaaagacttacttgct
tacttacgccttatcgcaaacaatgatgatgatctatcattggcacgtattattaatgag
ccgaaacgtggaatcggtgcaacgtcatttgaccgaattgcggtgaatgcacttgaagca
gatcgctcaatttttgatgcacttgcagaagttgatttcatgggcttacctggtaaagcg
acgaatgcgacaatccatttccatgcgatgatcaaaaatcttacgcaaatgcaagaatat
atgtcggtaactgaattagtagaagaaattcttgaaaaatcaggctaccgagaaatgttg
aaacttgaaaaaacaatcgaagcacaaagtcgtttagagaatattgatgagtttttatct
gtaacgaaagcgttcgaagcgcaaagtgaagataagacattagtcgctttcttaacggac
ttagcgttgattgctgatatcgatactttaggtaaagatgaggaagaaaaagacaaggga
gctggtgttgtattgatgacaatgcactcggcgaaaggtctagagttcccagtcgtcttc
atcattggtatggaggaaaatattttccctcactctcgttcaattaatgataatgatgaa
atggaagaagagcgccgccttgcgtatgttggaattacgcgtgctgaagaacagttattc
atctcgtgtgcgcaaactcgtacattatttggtagtagtagtttcaacagtccatctcgc
ttcattcaagaaatcgattcagaaattttagaagaaatcgcatctcaatcgtcatcattt
ggtggtagttcatcatcttcaacagctccaagacgtgcagcttcaggcgtccgtaaaacg
acgacaggtccaaacttgaaaacgacttcgaattacaaagagtctggtggcgaaaaaatg
acttgggcagctggcgataaagcctctcataaaaaatggggcgttggaacagttgtcagt
gtgcgtggtgagggagaagcgatggaacttgatattgcatttccaacccctacaggtatt
aaacgattattagcgaaattcgcaccaatcgataaagtataa
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integrated database retrieval system
