Kurthia zopfii: NCTC404_02041
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Entry
NCTC404_02041 CDS
T05934
Symbol
polA_1
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
kzo
Kurthia zopfii
Pathway
kzo03030
DNA replication
kzo03410
Base excision repair
kzo03420
Nucleotide excision repair
kzo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kzo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC404_02041 (polA_1)
03410 Base excision repair
NCTC404_02041 (polA_1)
03420 Nucleotide excision repair
NCTC404_02041 (polA_1)
03440 Homologous recombination
NCTC404_02041 (polA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kzo03032
]
NCTC404_02041 (polA_1)
03400 DNA repair and recombination proteins [BR:
kzo03400
]
NCTC404_02041 (polA_1)
Enzymes [BR:
kzo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC404_02041 (polA_1)
DNA replication proteins [BR:
kzo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NCTC404_02041 (polA_1)
DNA repair and recombination proteins [BR:
kzo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NCTC404_02041 (polA_1)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC404_02041 (polA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HGTP_anticodon
HHH_5
HHH
ISP_coupler
Motif
Other DBs
NCBI-ProteinID:
VEI06818
LinkDB
All DBs
Position
1:1984887..1987514
Genome browser
AA seq
875 aa
AA seq
DB search
MTQEKLLLLDGNSLAYRAFFALPPLTNSQGIHTNSVYGFTTMLQKILEEEQPTHILVAFD
AGKTTFRHSTYTEYKGGRQKTPPELSEQFPYLRKLVEAYNMKRYELENYEADDIIGTLAR
QAESRGLPVVVISGDKDLTQLATDNTTVYITRKGMTDIEHYTPAHIEEKYGLKPLQIIDM
KGLMGDASDNIPGVPGVGEKTAIKLLKEHPSVEEVYENIDAMKASKMKEKLVANKEQALM
SKELATILLEAPIEVKVDDLKWDGPNVDELFTLWKELDFKTLIEKSEYESEEHETMELDY
KIVDDLTDKELVTGLAIHLEIENEHYHTALQLGVAFVNEEQAYFVTYENVLKSESIKNYL
EDERKVKFVFDLKKHQAAFARDGIKLQGIEFDLLLAAYIDDPAFASDDVAAVSNHYHYSD
IQSNEVVYGKGAKRTNPEGEALAEHVCRQALAVFTVRNRVLKKLHENEQFDLYNEIELPL
AKVLAGMESEGIRVEESTLEEMGVEIKARLAEIEANIYAAAGEKFNINSPKQLGVVLFET
LGLPVIKKTKTGYSTAADVLDKLKPEHDIIEHILQYRQLGKLQSTYIEGLTKEIHADDHK
IHTRYQQALTATGRLSSTDPNLQNIPIRLEEGRKIRQAFIPEKEGWQLFAADYSQIELRV
LAHMSQDENLMQAFLHGLDIHTNTAMKVFHVEEGAVTSNMRRAAKAVNFGIVYGISDYGL
SQNLDISRKEAAEFIERYFESFPGVKTYMEDIVKEAKSQGYVTTLLNRRRYLPDLNSSNF
NLRSFAERTAMNTPIQGSAADIIKKAMIDMDLALKEHKLQAKMLLQVHDELIFEAPAEEI
AILEKLVPEVMANTVKLDVPLRADYSAGNTWYDAK
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaggaaaaattattattactggacggaaatagtctagcgtaccgcgcatttttt
gctttaccaccattaacgaatagccaagggattcatacgaactctgtgtatggatttaca
acgatgcttcaaaaaatattggaagaagaacaacctacacatattttagttgcatttgat
gcaggtaaaacgacatttcgccatagcacatatacagaatataaaggtggaagacagaag
acaccaccagaattatcggagcagttcccgtatttacgtaaactagtagaagcttataat
atgaagcgttatgaacttgaaaattatgaagcggatgatattatcggtacacttgcacgt
caagctgaaagccgaggattaccagttgttgttatttctggagataaggatttaacgcaa
ttggcgactgacaatacgacggtttatattacgagaaaaggtatgacagatatcgagcat
tacactccggctcatatcgaggaaaaatatggcctgaaaccacttcaaatcattgatatg
aaagggttaatgggcgatgcttcggataatattccaggcgtacctggcgttggagaaaaa
acagccattaaactattaaaagaacatccgtcagtagaggaagtttatgaaaatatcgat
gcgatgaaagcttctaaaatgaaagaaaagcttgtagcaaataaagaacaagcactgatg
agtaaggaattagcgacgatcttactggaagcaccaatcgaagtgaaggttgacgatttg
aaatgggatggcccaaatgtggatgaacttttcacactttggaaagagctagactttaaa
acattgattgagaaaagtgaatatgaatcagaagaacatgaaacaatggaattggattat
aaaattgtggatgatttaactgataaagaactagtgacaggcttagcgattcacttagaa
atcgaaaatgaacattatcataccgcgctacaactaggtgtagcatttgtaaatgaagaa
caggcctattttgtaacgtatgaaaatgtacttaaaagtgaatcaatcaaaaattattta
gaagatgagcgaaaagtgaaatttgtttttgatttgaaaaaacatcaagctgcgtttgcg
agagacggcatcaaactacaagggattgagttcgacctattattagccgcgtatattgat
gatcctgcattcgcttcagatgatgtagcggcagtgtccaatcactatcattattcggat
atccaatcaaatgaagtcgtatatggtaagggcgcaaaacgtacaaatccagaaggtgaa
gcacttgctgagcatgtttgccgacaagcgttagcggtctttacagtacgtaatcgtgtt
ttgaagaaattacatgagaatgaacaatttgatttatacaatgaaatcgagcttccttta
gcaaaagtactagcaggtatggagagtgaagggattcgtgtggaagaatctacacttgag
gaaatgggtgtggaaataaaagcacgtttagcagaaatcgaagcgaatatttacgctgca
gcaggtgagaaattcaatattaattcaccaaaacaactaggtgtcgtattatttgaaaca
cttggcttaccggtaatcaaaaaaacgaaaacaggctactcaacagcggctgatgtatta
gataaattaaagccagaacacgatattatcgaacatatattacaatatcgccaacttggt
aaattacaatcaacatatatcgaaggtttgacgaaggaaattcatgcggatgatcataaa
attcatacgagataccagcaagcgttaacggcgacagggcgattaagttcaacggatccg
aatctacaaaatatcccgattcgattggaagaaggtcgcaaaattcgccaagcattcatt
cctgagaaggaaggatggcagttattcgcagccgattattctcaaatcgaattacgcgtt
cttgcgcatatgtcacaagatgagaacttaatgcaagctttcttacatggcttagatatt
catacgaacacagctatgaaagtattccacgtggaagaaggtgctgtaacttcgaatatg
agacgcgcagcaaaagcggttaacttcggtattgtatacggaattagtgattatgggctt
tctcaaaacttagacattagtcgtaaagaagcagctgaatttatcgagcgttatttcgaa
agtttcccaggtgtcaaaacctatatggaagacattgtaaaagaagcgaaatcacaaggt
tatgtcacgacattattaaaccgccgtcgctatttaccggacttaaattcaagcaacttc
aatttacgtagttttgcagagcgtacagctatgaatacgccaatccaaggtagcgcagct
gatattattaaaaaagcgatgatcgatatggatttagctttaaaagagcataagctacaa
gcgaaaatgctattacaagtacatgatgaattaattttcgaagcacctgctgaggaaatt
gcaatcttagaaaaattagtgccagaagtaatggcgaatacagttaaattagatgtacca
ttacgtgcagactattctgctgggaacacttggtacgatgcgaaatag
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