Kurthia zopfii: NCTC404_02272
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Entry
NCTC404_02272 CDS
T05934
Symbol
sbcC
Name
(GenBank) Nuclease sbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
kzo
Kurthia zopfii
Brite
KEGG Orthology (KO) [BR:
kzo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kzo03400
]
NCTC404_02272 (sbcC)
DNA repair and recombination proteins [BR:
kzo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC404_02272 (sbcC)
Archaeal homologous recombinant proteins
NCTC404_02272 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
Cyc-maltodext_C
nSTAND_NTPase5
SMC_N
HigB_toxin
Motif
Other DBs
NCBI-ProteinID:
VEI07254
LinkDB
All DBs
Position
1:complement(2202974..2206045)
Genome browser
AA seq
1023 aa
AA seq
DB search
MKPIKLSMTAFGPYRDTETIDFTELESNQIFVISGATGAGKTTIFDGICFALYGSVSGEE
RENAGNVRSDFATDDLHTSVELVFQIKGKKYRILRQIGHVKKGNKSSTGDKTEFVEIVDG
QEIPVLDSHRVRDLNLKLEELIGLTKDQFKQIVMLPQGEFRKLLTSDSKNKEAILRKIFK
TESFDQMTNRLKSKKTEAEKQMAAIQAEEQAFIQNIQDTLPLRQSKVFEVLAQEYKSSTQ
LIAGLQEEAEYYEELTTSQQALLDDQKRVVDQVQKEFNHAEQFNKELALYEQAKIEKTRL
ESKEEYIQGQRNQLTQAEKAEHIIPYEQTFRNQRMELVKLQEQLTALIAQSKEASQRFEE
AKKEYDAFQKNMPQQQNDLDQLKDWNRILPFYAEVTQLQKQLQLKTVDFEKMQKDIVNWT
EQSKIIKSEIVILNDERKKLKLATEKFEEVYEQKSKVDQVVTRAQKAEAYKKDLSQIEEL
QKNAVILFEQAKVDYSELEKNWISSQAYILAEQLVDGEPCPVCGSKSHEKMHDLTATVVT
KEDLEAANEKRQKSEKELHSFQAKIEQLHELIAQENQMIEEVTTEGLPYLLTLQQQLSAQ
LHEIQNNKSKLNQLEQTSASKEDSLEKMRNSLNELNVMSSQSSMEISELQLLIREKIAQL
PKSFEHQQQLENSIAELMKKTTVFEREMKNAITQYEIALKNSTSVMTSQENQQKYVQQAE
EKLAQAEEQFKAKVLEAGFENGKEYTSARLLPEQMTAIRQELEKFSQQLFALNQQIEKGK
AQFDQQEKFELEKIQLKLSTETAQLTQRINDINNTVHLTKNIARMLQQMKKSNEEKAALE
SRAGNIIKLYDLLSGKNTQKISFERYLQIEYLEQIIQAANERLLPLSNGQYRLSRSERLD
SNGKQSGLSLDVYDTYTGQERDVKTLSGGEQFNASLCLALGMSDMIQSFRGNVQMETMFV
DEGFGTLDEEALAKAIDTLVELQKTGRMIGIISHVAELKDTIPATLLVKKSKEGYSHTQF
MIK
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaattaaattgagtatgactgcatttggcccatatcgagacacagaaacaatc
gatttcacggaattggagtcaaatcaaatattcgtcatttctggtgcaactggcgctggt
aaaacgacgatttttgatggcatctgttttgcattgtatggcagtgtaagtggggaagaa
cgtgaaaatgctggcaatgtacgaagtgattttgcgacggacgatttacatacttcagta
gagctcgtttttcaaataaaggggaagaaatatcgcattcttcgacaaatcggccatgtg
aagaagggaaataagtcttcaacaggcgataaaactgaatttgtagaaatagtagatggc
caagaaattcctgtacttgattcacatcgtgtccgtgatttgaatttgaaattagaagaa
ttaatcggcttaacaaaggatcaattcaagcaaattgtcatgctaccacaaggtgaattt
agaaaattattaacatctgattcgaaaaataaagaagcaattttaagaaagattttcaaa
acggaaagcttcgatcaaatgacaaatcgcctgaaatcaaagaaaacagaagctgaaaaa
cagatggccgctattcaagctgaagaacaagcattcatccaaaatattcaagatacgctg
ccacttcgtcaaagtaaagtgttcgaagtgttagctcaagagtataaatcatctacgcaa
ctgattgcaggattgcaggaagaagccgaatattatgaggaattaacgacttcacaacaa
gctttattagatgatcaaaaaagagtagtcgatcaagttcaaaaagaatttaatcacgcc
gagcagtttaataaggaattggcactttatgaacaagctaaaattgaaaaaactcgttta
gaaagtaaagaagagtatattcaaggacaaagaaaccaattaactcaagctgaaaaagca
gagcatatcatcccgtatgaacagacttttcgcaatcaaagaatggaactggtgaaactt
caagaacagcttactgcattaatcgcgcaaagcaaagaagcttcacagcgatttgaagaa
gcaaaaaaagaatatgatgcatttcaaaaaaatatgccacagcagcaaaatgatttggat
caactaaaagattggaacagaattcttccattttatgcagaagtaactcaattacaaaaa
caattacaattaaaaacggttgattttgagaaaatgcagaaagatattgtaaattggacg
gaacaatcaaagattattaaaagtgagattgtcattctaaatgatgaaagaaagaaattg
aaactggctactgaaaaatttgaagaagtttacgagcagaaatcaaaagtcgatcaagtt
gtaacgcgcgctcaaaaagcagaagcgtataagaaagacttgtcacaaatcgaagagtta
caaaagaatgccgtcattttatttgaacaggcaaaagttgattattcggagttagaaaaa
aactggatttctagccaagcgtatattttagccgagcaactggttgatggagaaccttgt
ccggtttgtgggagcaaaagccatgaaaaaatgcatgatcttacggctacagtagtgacg
aaagaagatttggaagcggcaaatgaaaaaaggcagaaatcagaaaaagagcttcacagt
tttcaggctaaaatcgaacagttacatgagttaatcgcacaagaaaatcaaatgattgaa
gaagtgacaacagaaggactaccttatttactaactttacagcagcaattatcggcacag
ttacatgagatccaaaataataaaagcaagctaaatcaattagagcaaacaagcgcaagt
aaagaagattcacttgaaaaaatgaggaattcgttaaatgaactgaatgtaatgagtagt
caaagttcgatggaaatctcagaactacaattattaattcgggagaagatagcgcaactt
ccaaaatcatttgaacatcaacagcaattagaaaattcaattgctgagctaatgaagaaa
acgacagtatttgagcgcgaaatgaagaatgccattacacaatatgaaattgcattgaaa
aactcaacttcagtaatgacttcacaggaaaatcagcaaaaatacgtccaacaagccgaa
gaaaaattagcgcaagccgaggagcagtttaaggcgaaagtgttagaagcagggtttgaa
aacggaaaagaatatacatccgcacgattactaccagaacaaatgactgcaattcgtcaa
gaattagagaaattcagtcagcaattatttgcattaaatcagcaaattgaaaaaggtaaa
gcacaatttgatcaacaagagaaatttgaacttgaaaaaattcaattgaaattatcaact
gaaacggcgcaactgactcaaagaattaatgacataaataatacagttcatttaacgaaa
aatattgcacgaatgctccaacagatgaaaaaatcaaatgaagagaaagctgcattagaa
agtagagcaggcaatattattaaactatatgatcttctttcagggaaaaatacgcagaaa
atctcatttgagcgatatttacaaattgagtatttggaacaaatcattcaggcagctaat
gagcgattactacctctttcaaatggtcagtaccgcctatcgagaagtgaaagacttgat
tcgaacggtaagcaatctggattaagcctagatgtttatgacacgtatacagggcaagaa
cgtgatgtgaagacgctatcgggcggtgagcaatttaatgcatcactctgccttgcactt
ggaatgagtgatatgattcaaagctttagaggaaatgttcagatggagacgatgtttgtc
gatgaaggatttggtacgcttgatgaagaagctttggcgaaagcgattgatacgctagtc
gaactacaaaaaacgggtcgaatgatcgggattatttcgcatgttgctgaattaaaagat
acaattccagcgacattactcgtgaaaaaatcaaaagaaggctatagtcacactcaattt
atgattaaataa
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