Candidatus Liberibacter asiaticus gxpsy: WSI_01910
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Entry
WSI_01910 CDS
T02506
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
laa
Candidatus Liberibacter asiaticus gxpsy
Pathway
laa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
laa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WSI_01910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
laa03021
]
WSI_01910
03019 Messenger RNA biogenesis [BR:
laa03019
]
WSI_01910
Transcription machinery [BR:
laa03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
WSI_01910
Messenger RNA biogenesis [BR:
laa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
WSI_01910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
NACHT
AAA_25
AAA
Spore_III_AA
ANAPC4_WD40
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AGH16752
UniProt:
A0ABM5NFF2
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All DBs
Position
429770..431032
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AA seq
420 aa
AA seq
DB search
MKLQELKNKSPTKLLAFAESLEIENANVMRKQELMFSILKVLSGRDVEIIGEGVIEVLQD
GFGFLRSPDANYLAGPDDIYVSPSQIKSFSLKTGDTVEGSIRAPREGERYFALLKVNAIN
FDVPERVRNKIHFDNLTPLYPDKRFNMELNNPENKDISSRVIDLIAPIGKGQRSLIVAPP
RTGKTILLQNIAHSIKKNHPECYLIVLLIDERPEEVTDMQRSVQGEVISSTFDESAARHV
QVAEMVIAKAKCLVEYGLDVVILLDSITRLCRAYNVLMPSSGKILTGGVDANALQRPKRF
FGAARNIKEGGSLTIIGTALVDTGSRMDEVIFEEFKGTGNSEIVLERKIADKRIFPAMDI
IKSGTRKEDLLVERQDLQKVFMLRRIVSSMNSSDAIEFLIDKLKQTKDNKDFFYSMNKQN
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaagctccaagagcttaaaaataagtctccaaccaaacttcttgcttttgctgaatca
cttgaaatagaaaatgctaatgttatgcgaaagcaagaacttatgttttctatattaaaa
gttttatctggtcgagatgtggaaattataggggaaggagttattgaagttcttcaagat
ggttttggttttttacgctctcctgatgctaactatttagctggtccagatgatatttat
gtttctccttctcaaattaaaagtttttctttaaaaacaggtgacacagttgaagggtca
atccgtgctcctagagaaggtgaacggtattttgcccttttaaaagtaaatgctattaat
tttgatgttccagaaagagtgagaaataaaatacattttgataatttaaccccgctttat
ccggataaaagattcaatatggagctgaataatccggaaaataaagatatatcttctcgt
gttattgatctaatagctcctattggtaagggacaaagaagcttgatagttgctccccct
cgtacaggtaagacaattcttttacaaaatatagctcattcaattaaaaaaaatcatcca
gaatgttatctaattgtattgcttattgatgaaaggccagaagaagtaactgatatgcag
aggtccgtacaaggggaagtgatatcttcaacgtttgatgagtctgcagcccgccatgta
caggttgccgaaatggtcattgcgaaagctaagtgtcttgtagaatatggacttgatgtt
gtcatactattagattcaattactcgtttatgtcgtgcttataatgttctaatgccatct
tctggaaagattttaactggaggagtggacgcaaatgcacttcaacgtccaaaaagattt
tttggtgcagcgagaaatataaaagaagggggatctcttactattattggtacagcgttg
gtagatactgggagtcgtatggatgaagtgatttttgaagagtttaaaggtactggtaac
tctgaaatagttttagaaagaaagatagcagataagcgtattttccctgctatggatatt
attaaatctggaactcgtaaagaagatcttttggtagaacggcaagatcttcaaaaagtg
tttatgttacgtcgtattgtttcttctatgaatagttctgatgctatagaatttttaatt
gataagttaaaacaaaccaaagacaataaagactttttttattcaatgaataaacagaat
tga
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