Candidatus Liberibacter asiaticus gxpsy: WSI_03515
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Entry
WSI_03515 CDS
T02506
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
laa
Candidatus Liberibacter asiaticus gxpsy
Pathway
laa03030
DNA replication
laa03430
Mismatch repair
laa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
laa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
WSI_03515 (dnaE)
03430 Mismatch repair
WSI_03515 (dnaE)
03440 Homologous recombination
WSI_03515 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
laa03032
]
WSI_03515 (dnaE)
03400 DNA repair and recombination proteins [BR:
laa03400
]
WSI_03515 (dnaE)
Enzymes [BR:
laa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
WSI_03515 (dnaE)
DNA replication proteins [BR:
laa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
WSI_03515 (dnaE)
DNA repair and recombination proteins [BR:
laa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
WSI_03515 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DUF655
Ribosomal_S13
HHH
Motif
Other DBs
NCBI-ProteinID:
AGH17073
UniProt:
A0ABN4B6K9
LinkDB
All DBs
Position
782257..785931
Genome browser
AA seq
1224 aa
AA seq
DB search
MVFISRFSKERKLPLTQYLEKSPSFVHLQVHSSYSLLEGALSLNNILDKIAADQQPAIAI
TDTNNLFSALEFSQKACAAGIQPIIGCQLDIDMQDNLKMTNQGKTPFPTVPSIVLLVSTA
EGYQRLIELVSRMYLLDQGKQSVRICLSWLQEIGTEGLIMLTGGSSGPIDRAFFFNSSQV
AEKRLLTFKKLFGDRLYVNLQRHRGYDRYRESQVVQLAYTHELPLVATNNSLFLSEEDYE
AHDVLMAVAHSTVVSQKDRPRVTPDHYLKNRSEMVSIFSDLPEALENTVEIARRCSFILQ
VHAPILPRFIEKECDDIQKEEENELRNKAVAGLEVRLAQGAIAKGYHAQDYRQRLDFELN
VIARMKFSGYFLIVADFIQWAKKNNIPVGPGRGSGAGSVTAYALTITDIDPLRFSLLFER
FLNPDRMSMPDFDIDFCQDRRDEVIRYVQNKYGHERVAQIITFGSLQAKAALRDVGRALQ
MPYSQVDRLCKLIPNDPAHPVSLQAIADDSRFREARLADPSVDRLLEISQKLEGLYRHAS
THAAGIVIGDRPLSQLVPMYRDVRSDLPVTQFNMKWIEKAGLIKFDFLGLKTLTLLQKSL
DFLAQRGVKVDLSLIPFDDHETYHLLTTKGTLGIFQLESSGMRQALEGMQPDCIEDIIAL
VSLYRPGPIDNIVVYNNRKNGKEKIVSIHPLIDPMLKETQGVIIYQEQVMQIAQLLSGYS
LSEADVLRRAMGKKIKEEMDKQKERFISGASKNGISKTIAVNIFELLAKFADYGFNKSHA
AAYAVISYQTAWMKTHYPVEFLAASMTLEMDNVEKIKKFCQDARQFNIQIMPPSVNTPCV
DFKVGDNRIYYSLAAIKGVGTTTARHIMEASADKPFDSLEDFCSRVDSKKLNRRVLESLV
FAGALDCFGYSRMQLLQSLDNIQKYAQWVEKNRTNKHENIFAHEKGTFSDKITLEKFSVE
NSSVRFENEQRVLGFYFSGHPLDVYKPILRKMGIKGYEESVATIRGNNIRLAAMVVSKQQ
KKTRKGSRIGWVTFSEPAKEYEAIFFPKNNNRKGKKKPDGNHDFLFLEDCYDHAIEMKLQ
EAEEDPNFLSLQEQQQLEEEKPRLLREKKPYIIVVSQEDKLSLQRDSIRLLWVESLEKKS
MEMLDSLRVYLQDRSPLREIHKYFENRQTQNYDKQGKIGLIFLRSQGKIEIEITLDHYPI
SPEIAFDLEHITGITKVVQVIHNE
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
gtggtgttcattagtagattttcaaaagaaagaaagttacccttgacacaatatttagaa
aaatcacctagttttgtacatttgcaagtgcattcttcgtattccttgttggaaggagct
ctttctttaaataatattttagataaaattgccgcagatcaacaacctgctattgcgatt
actgacacaaataatctttttagtgcattggagttttcgcaaaaagcttgtgctgctggc
attcagcctattatcggctgtcaactagatattgatatgcaagataatttaaaaatgact
aatcagggaaaaacacctttcccaactgttccttctatagttcttttagtatcgactgcc
gagggatatcagcgattaattgagcttgtcagtcgtatgtatctcctagatcagggaaaa
caatctgttcgtatttgtttgtcttggttgcaagagatagggacagaaggccttattatg
ttaacaggtgggagttctggtccgatagatagagctttttttttcaatagttctcaagta
gcagaaaaacggcttcttacttttaaaaagctttttggcgatcgtctctacgtcaattta
cagcgtcatcggggatacgatcgctatcgtgaaagtcaggtagttcaattagcatacacg
catgaattgcctttggttgcaactaataattccttatttctatctgaagaagattacgaa
gctcatgatgtattgatggcagtggcacattcaactgtcgtgtctcagaaagatcgtcca
cgagtcacgcctgatcactatttgaaaaatcgttctgagatggtctctatattttcggat
ttaccagaagctttagaaaatacagtagaaattgctcggcgttgttcttttattcttcaa
gtacatgcaccgatcttgccacgttttattgaaaaagaatgtgatgatattcaaaaagaa
gaagaaaatgagttgcgcaataaagcagtagcaggattagaagtacgccttgcccaaggt
gccatagcaaaaggataccatgcacaagattacagacaacgtcttgattttgagttgaat
gtcatcgcacgtatgaagttttcaggatatttcttgatcgttgctgattttatacaatgg
gctaaaaaaaacaatattccggtaggtcctggacgtggttcaggagcaggttctgtcact
gcctatgctttgacaattactgatattgatcctttacgtttttcacttctctttgaacgc
tttttgaacccagatcggatgtcgatgccagattttgatattgatttttgtcaagatcga
cgtgatgaagttattcgatatgtacaaaacaaatatgggcatgaacgagttgctcaaatt
attacttttggctctttgcaggctaaggcagcattacgtgatgtggggcgagctttgcaa
atgccgtattctcaggttgatcgtctttgtaagttaatacctaatgatccggcgcatcct
gtttctcttcaagctattgccgatgattctcgttttcgagaggctaggttagctgatcct
tctgtggatcgtcttcttgaaatttctcaaaaattagaaggattatatcgacatgcttcc
actcatgcagcgggtattgtcattggtgatcgtccattatcacaattagtacctatgtat
cgtgatgtacgatccgatctgccagtaacacaatttaatatgaaatggattgaaaaagct
ggtttaattaagtttgattttctgggtcttaaaacgcttactttattacaaaaaagcctc
gattttctcgctcaacggggagtaaaagttgatttatcactcattccttttgatgatcac
gagacatatcatcttctaacgacaaaaggcactttaggtatatttcaattggaaagttct
ggaatgcgtcaagccttggaaggtatgcaaccggattgtattgaggatattatagctctc
gtttcattgtatcgtccgggaccaattgacaatatcgttgtgtataataatcgaaaaaat
ggaaaagaaaaaatagtttctattcatccattaattgatcctatgctcaaagaaacccag
ggagttattatctatcaagagcaagttatgcaaatagctcaattactttcaggatattct
ctcagtgaagcagatgtcttgcgtcgggcaatggggaaaaaaattaaagaagaaatggat
aaacagaaagagcgttttatttctggagcaagcaaaaatggtataagcaaaacaatagct
gtgaatatttttgaattattagcgaaatttgcagactatggctttaataaatcacatgct
gctgcttatgcggttatttcttatcaaaccgcatggatgaaaacgcattatcctgttgaa
tttttagccgcttccatgactctagaaatggataatgtagaaaaaattaagaaattttgt
caggatgcacgtcaatttaacattcaaattatgcctccatcggtgaacaccccatgtgta
gattttaaggtgggagataatcgtatttattattctttggctgctattaaaggtgtagga
acgacaacagcacgtcatattatggaagcgtctgccgacaaaccatttgatagcttagaa
gatttttgctcgagagtggattcaaagaaattaaatcgtcgggtattagaaagtctagtt
tttgcaggagcgttggattgttttggatatagtcgtatgcaattattacaatctcttgat
aatattcaaaagtatgcgcagtgggttgaaaaaaatcgtacaaacaagcatgaaaatatt
tttgctcatgagaagggaactttttctgacaaaattactttggagaaattctcagttgag
aattcttctgtgcgatttgaaaatgaacaacgggtattaggtttttatttttcaggacat
cctcttgatgtgtataagccaatactacggaaaatgggtattaagggttatgaggaaagc
gttgctactatcaggggtaataatatccgattagcagcaatggtggtatcgaaacagcaa
aagaagacacgcaaggggagtagaataggttgggtgactttttctgagccagcaaaggaa
tatgaggcaatttttttccctaaaaataataatagaaagggaaaaaagaagccagatggg
aatcatgattttttatttcttgaagattgttatgatcatgcaatagaaatgaagctgcaa
gaagcagaagaagaccccaattttttatcattacaggaacaacagcaattagaagaggaa
aaacctcgtttattaagagaaaagaaaccatatattattgttgtttctcaagaagataag
ttatcacttcaaagagattcgattcgcctattgtgggtggaatctttagaaaagaaatcc
atggagatgttggattctttgcgggtataccttcaagatcgcagtccccttcgagaaatt
cataaatattttgaaaatcgtcaaactcaaaattatgataaacagggaaagataggtctg
atttttttgagatcacaaggaaaaatagaaatagaaataacgctggatcactatcctata
tcgccagaaattgcctttgatcttgaacatattacgggtataaccaaggtcgttcaagta
atacataatgaataa
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