Lysobacter antibioticus 76: LA76x_0077
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Entry
LA76x_0077 CDS
T04154
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
lab
Lysobacter antibioticus 76
Pathway
lab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LA76x_0077 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lab03400
]
LA76x_0077 (recC)
Enzymes [BR:
lab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LA76x_0077 (recC)
DNA repair and recombination proteins [BR:
lab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LA76x_0077 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ALN78239
UniProt:
A0A0S2F3T8
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All DBs
Position
77065..80445
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AA seq
1126 aa
AA seq
DB search
MPARADFRLYHSNALDVLAGLLAQELRTPAPGQPLLAPDVILIPQVAMRRWLQATLAQAY
GIAANLEFLTPGEFVQRALDANATEQDRDHPGEDLDAQALRWRLYEVLSQPGQMREPALA
PLRAYLDGDDPLKSWSLSGELASLFEKYQAWRRDWLLAWDAGHERNDPQAALWRRVAAGR
RYRARRIDDYLTRFQGEAGIAHPPRGLPPRLFAFATLNVSPDVLRMIATQSIAGTLHFYL
PTPTRKYWGDLGTLAERLRLGEDAAFGDDENPLLQAWGAAGRDFMAVLGGYEVVHPSGEI
AAYADPEESRHDDPARDSLLQRLQRDLLHRRALPATPWRERVDRGDASLQVHACHTRLRE
VQVLHDQLQGLLDPNSAEGRRFDPPLQPREIAVLAPDIDPYAPHIAAVFGGLAGRPGFIP
YALADASPLASEPLAEVFLRLLALPVSRFGLSEILDLLATPAIADQAGLDGAGLERLRTW
LQNAGARWGIDAAHRSRHDAPGDDAYTWAFALDRLLLGHAAGDGAAPDEMIAGIAPYAEL
EGASLDALDALIRLLRVLARFERALDAELSPAHWADRLLGLLRAMLPERPRDATDQRTLE
RLRNLIESFARDAAKAGFEGTVGAEVVRSHFRAALAEADTRAPLLTGGVSFGRMVPMRLI
PFRVICLLGMNDGDYPRRDPAGGLNRLAAELGTAARRHGDRSLRDDDRFLFLQLFGAASD
SFYLSYLGADPRDGSQREPSTLVSELLDVAARYHADPAAARSEFVVREPLQPFAAAAFGA
GEREPEPRRFSYRAEWRPAVDAGALGLRGEIGPWLNEPLPPDPDAADDGSVTYQDLRSFL
RDPPTAFLRQRLGLRLPDEIDSSDDVEPLVLPGPGLFRQQLQRAVFDDLIAGGGRIDRER
LQATLRARALLPSGPLGRRQLDALLGQVRPYADAFAGWRSGEAEALPFELDLGDARLLGR
LDDVYAGGLARLRFDSLHGPSQIAHGLDWLVLSALGDRRPLAQFAQVDGGPGPHLRAALA
PGEAQAALRTLLRLRDYGLRAPLPFLPRAGWLWYEAAAQDKDGWGKAESQWHGSPRSWGE
ATTPGARLALRGRDPFRDPMLGEEFREIATLVFGAVVHGRDEGGGA
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcgcgtgccgatttccgtctttatcattccaatgcgctggacgtgctggcgggt
ctgctcgcgcaggagttgcgcacgcccgcgccggggcagcccttgcttgcgcccgatgtg
atcctgatcccgcaagtggcgatgcgccgttggctgcaggcgacgctggcccaggcctac
ggcatcgccgccaatctggaattcctgaccccgggcgaattcgtccagcgcgcgctcgac
gccaacgcgaccgagcaggaccgcgatcaccccggcgaggacctcgatgctcaggccctg
cgttggcgcttgtacgaggtgttgtcgcagccggggcaaatgcgcgagccggcgctggcg
ccgctgcgcgcctatctcgacggcgacgacccgctgaagtcgtggtcgctgtcgggcgag
ttggcctcgctgttcgagaagtaccaggcctggcgccgcgactggctgctggcctgggac
gccggccacgaacgcaacgatccgcaggccgcgctgtggcgccgggtcgccgccggccgc
cgctaccgcgcgcgccgcatcgacgattacctgacccgcttccagggcgaggccggcatc
gcgcatccgccgcgcggactgccgccgcgcttgttcgccttcgccaccctcaacgtctcg
cccgacgtgctgcggatgatcgcgacccagtcgatcgccggcaccctgcatttctatctg
ccgaccccgacgcgcaagtactggggcgacctgggcactctggccgaacgcctgcgcctg
ggcgaggacgccgccttcggcgacgacgagaacccgttgctgcaggcctggggcgcggcc
ggccgcgatttcatggcggtgctcggcggttacgaggtcgtgcacccctccggcgaaatc
gccgcctacgccgatcccgaagagagccgtcacgacgatcccgcgcgcgacagcctgctg
cagcgcctgcaacgcgacctgctgcatcggcgcgcgctgccggcgacgccgtggcgcgag
cgcgtcgatcgcggcgatgccagcctgcaggtgcacgcctgccacacccgcctgcgcgaa
gtgcaggtgctgcacgatcagttgcagggcctgctcgatccgaactcggccgagggccgg
cgcttcgatccgccgttgcagccgcgcgagatcgcggtgctggcacccgacatcgatccc
tacgcgccgcacatcgccgcggtgttcggcggcctggccgggcgcccgggtttcattccg
tatgcgctggccgatgccagcccgctcgcgtccgagccgctcgcggaagtgttcctgcgc
ctgctggccttgccggtttcgcgcttcggcctcagcgaaatcctcgacctgctggcgacg
ccggcgatcgccgatcaagccggcctcgacggcgccggccttgaacgcctgcgcacctgg
ctgcagaacgccggcgcgcgctggggcatcgacgccgcccatcgcagccgccacgacgcc
cccggcgacgacgcctacacctgggcgttcgcgctcgaccgcctgttgctcggccacgcc
gccggcgacggcgccgcgcccgacgagatgatcgccggcatcgcgccctatgccgaactc
gaaggcgcctcgctggatgcgctggatgcgttgatccgtttgctgcgggtgttggcgcgc
ttcgaacgggcgctcgatgccgagctgagcccggcgcactgggccgaccgcctgctcggc
ctgttgcgggcgatgctgcccgaacgcccgcgcgacgccaccgaccagcgcaccctcgaa
cgcctgcgcaacctgatcgaaagcttcgcccgcgatgccgccaaggccggcttcgaaggc
acggtcggggcggaagtggtgcgcagccatttccgcgccgcgctcgccgaggccgacacc
cgcgcaccgctgttgaccggcggcgtcagcttcggccgcatggtgccgatgcggttgatt
ccgttccgggtgatctgcctgctcggcatgaacgacggcgactatccgcgtcgcgacccg
gccggcggcctcaaccggctcgccgccgaactcggcaccgccgcgcgccgccacggcgac
cgctcgttgcgcgacgacgaccgcttcttgtttctgcagttgttcggcgccgcctccgac
agcttctacctgagttacctcggcgccgatccgcgcgacggcagccagcgcgaaccctcg
accctggtctcggaactgctcgacgtggccgcgcgctaccacgccgatccggccgcggcg
cgcagcgagttcgtggtgcgcgaacccctgcagccgttcgctgcggccgcgttcggcgcc
ggcgagcgcgagccggagccgcgccgtttcagttaccgcgccgaatggcggccggcggtc
gacgccggtgcgctcggcctgcgcggcgagatcggcccctggctcaacgagcccttgccg
ccggatcccgatgcggccgacgacggcagcgtgacctaccaggacctgcgcagcttcctg
cgcgacccgccgaccgcgttcctgcgccagcgtctcggtctgcgcctgcccgacgagatc
gacagcagcgacgacgtcgagccgctggtgctgcccggcccgggcctgttccgccagcaa
ctgcagcgcgcggtgttcgacgacctgatcgccggcggcggccgcatcgaccgcgagcgc
ctgcaggcgacgttgcgcgcgcgcgcgctgttgccgtccggcccgctcggccggcgccag
ctcgatgctctgctcggtcaggtgcggccctatgccgacgccttcgccggctggcgcagc
ggcgaggccgaagcgttgccgttcgaactcgacctcggcgacgcgcgcctgctcggccgg
ctcgacgacgtctacgccggcggcctcgcgcggctgcgtttcgacagcctgcacgggccg
tcgcagatcgcccacggcctcgactggctggtgctgtcggcgctcggcgaccggcgcccg
ctggcccagttcgcccaggtcgacggcggccccggtccgcatctgcgcgcagccttggcg
ccgggcgaggcccaggccgcgttgcgcaccctgctgcgcctgcgcgattacggcctgcgc
gcgccgctgcccttcctgccgcgcgccggctggctctggtacgaagccgccgctcaggac
aaggacggctggggcaaggccgagagccaatggcacggcagcccgcgcagttggggcgag
gcgaccacgcccggcgcgcgcctggccttgcgcgggcgcgatccgttccgcgacccgatg
ctcggcgaagaattccgcgagatcgccacgctggtgttcggcgccgtcgtccacggccgc
gacgaaggcggcggcgcatga
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