Lysobacter antibioticus 76: LA76x_0095
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Entry
LA76x_0095 CDS
T04154
Name
(GenBank) eukaryotic DNA topoisomerase I, catalytic core family protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lab
Lysobacter antibioticus 76
Brite
KEGG Orthology (KO) [BR:
lab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lab03032
]
LA76x_0095
03400 DNA repair and recombination proteins [BR:
lab03400
]
LA76x_0095
Enzymes [BR:
lab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LA76x_0095
DNA replication proteins [BR:
lab03032
]
Prokaryotic type
DNA Topoisomerases
LA76x_0095
DNA repair and recombination proteins [BR:
lab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LA76x_0095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF7508
Motif
Other DBs
NCBI-ProteinID:
ALN78257
UniProt:
A0A0S2F4D1
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All DBs
Position
107870..108934
Genome browser
AA seq
354 aa
AA seq
DB search
MSERAPSAAVNRRAARAAGLRYVNDGEPGILRRRAGRGFAYRDARGHAVQAAKTLERIRA
LAIPPAYTEVWICADARGHIQATGRDARGRKQYRYHPQWRQRRDEGKFERVIAFGRALPA
LRRCVRRDLKLPGFPRDKVLAIVVAVMAETLLRIGNHEYARSNRSFGLTTLRNRHVEFLR
DGRARFRFRGKSGLAQEVELDNARLNRLVRRCQQLPGQALFQYRDDDGRLQPIDSGAVND
YLQRAMGADFSAKDFRTWGGTLAAFRRLAALPLPEPARGGAPSERALASAQNAVIGEVAQ
ALRNTPSVCRKAYIDPAVFVGWREGRLARYADGVRGELQWERAALRFLKQARRS
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcgagcgccttcggctgcggtcaatcgccgcgccgcgcgcgcggccggcttg
cgttacgtcaacgacggcgagcccggcatcctgcgccggcgtgccgggcgcggcttcgcc
tatcgcgatgcgcgcggccacgcggtgcaggcagcgaagaccctcgaacgcatccgcgca
ctggcgattccgccggcctataccgaggtctggatctgcgccgacgcgcgcggccacatc
caggcgaccggccgcgatgcgcgcgggcgcaaacaataccgttatcacccgcaatggcgg
cagcgccgcgacgagggcaagttcgaacgcgtgatcgccttcgggcgcgcgctaccggcg
ttgcgccgctgtgtgcgccgcgacctgaagctgccgggcttcccgcgcgacaaggtgttg
gcgatcgtggtggcggtgatggccgagaccttgctgcggatcggcaaccacgagtacgcg
cgcagcaaccgctcgttcggcctgaccaccttgcgcaaccgccacgtcgaattcctgcgc
gacggccgcgcgcgctttcgctttcgcggcaagagcgggctggcgcaagaggtggaactc
gacaacgccaggctgaaccggctggtgcggcgttgccagcaattgccggggcaggcgctg
ttccagtatcgcgacgacgacggccgcctgcagccgatcgattccggcgcggtcaacgac
tatctgcagcgcgcgatgggcgccgacttcagcgccaaggatttccgcacctggggcggc
accctggccgcgttccggcgcctggccgcgttgcccttgcccgaacccgcgcgcggcggt
gcgccgagcgaacgcgccctggcctcggcgcagaacgcggtgatcggcgaagtcgcgcag
gctttgcgcaacactccgtcggtttgtcgcaaggcctacatcgacccggccgtgttcgtg
ggctggcgcgaaggccggttggcgcgttacgccgacggcgtccgcggcgaactgcaatgg
gagcgcgcggcgctgcgattcctcaagcaggcgcggcggagctag
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