Lysobacter antibioticus 76: LA76x_0273
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Entry
LA76x_0273 CDS
T04154
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lab
Lysobacter antibioticus 76
Pathway
lab03420
Nucleotide excision repair
lab03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LA76x_0273 (uvrD)
03430 Mismatch repair
LA76x_0273 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lab03400
]
LA76x_0273 (uvrD)
Enzymes [BR:
lab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LA76x_0273 (uvrD)
DNA repair and recombination proteins [BR:
lab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LA76x_0273 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
LA76x_0273 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
DUF3553
Motif
Other DBs
NCBI-ProteinID:
ALN78435
UniProt:
A0A0S2F4I4
LinkDB
All DBs
Position
309049..311229
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AA seq
726 aa
AA seq
DB search
MDVSHLLDALNPAQREAVSAPPGHYLVLAGAGSGKTRVLTHRIAWINEVFGVPTHGILAV
TFTNKAAGEMRGRVDAQLRHGARGMWIGTFHGLAHRLLRLHWQEAKLPEGFQVLDSDDQL
RLVKRVVQALELDETRFPPRQIVWWINAQKDEGRRPRNIQPAGDEWADVMLRCYEAYQER
CERAGLVDFAELLLRAHELLRDNAALLAHYRNRFREILVDEFQDTNAIQYAFVRVLAGDS
GRVFVVGDDDQAIYGWRGAKVENVQRFLRDFPGASTIRLEQNYRSSANILDAANAVIAHN
PDRLGKKLWTDTGHGEAIDMYAAYNEMDEARFVVERLRQWVRDGGSYGDVAVLYRSNAQS
RAYEEALLSEQVPYRVYGGQRFFERAEIKDTLAYLRMIANRADDAAFERAVNTPTRGIGE
RTLDEVRKRARADAVSLWEAARRISQENGLAARARNALAGFALLIDTLESDVVEMPLPEK
IDHILQRSGLREHYANESRGQLDSRTDNLDELVSVASRFTRTDEDEAAAMPELIAFLSYA
ALEAGEGQAQAGEDGVQLMTLHSAKGLEFPLVFLGGLEEGLFPSGRSTEESGRLEEERRL
AYVGITRAREKLVLSYAETRRIHGMDMFGVPSRFLREIPPALLNEVRPKVQVSRPVYGAG
PRRADYGHAAIEAPPVKLGSQVRHASFGTGTVTDYEGTGAHARVQVNFDDAGSKWLVLAY
ANLQPL
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggacgtatcgcatttgctcgacgcactcaatcccgcccagcgcgaagccgtttcggca
cctcccggtcattacctcgtgctcgccggcgccggcagcggcaagacccgcgtgctgacc
caccgtatcgcctggatcaacgaagtcttcggcgtgccgacccacggcatcctcgcggtg
accttcaccaacaaggccgccggcgaaatgcgcggccgcgtcgacgcgcagctgcgccac
ggcgcgcgcggcatgtggatcggcaccttccacggcctggcccaccgcctgctgcgcctg
cactggcaggaggccaagctgccggaaggcttccaggtgctcgacagcgacgaccagctg
cgcctggtcaagcgcgtggtgcaggcgctggagctcgacgagacccgcttcccgccgcgc
cagatcgtgtggtggatcaacgcccagaaggacgaaggccggcggccgcgcaacatccag
ccggccggcgacgaatgggccgacgtgatgctgcgctgctacgaggcctaccaagagcgc
tgcgaacgcgccggtctggtcgacttcgccgaactgctgctgcgcgcgcacgagctgctg
cgcgacaacgccgcactgctcgcgcattaccgcaaccgcttccgcgagattctggtcgac
gagttccaggacaccaacgcgatccagtacgccttcgtgcgcgtgctcgccggcgactcc
ggccgcgtgttcgtggtcggcgacgacgaccaggccatctacggctggcgcggcgccaag
gtcgagaacgtgcagcgcttcctgcgcgatttccccggcgccagcaccatccgcctggag
cagaactaccgctccagcgccaacatcctcgacgccgccaatgcggtcatcgcccacaac
cccgaccgcctcggcaagaagctgtggaccgacaccggccacggcgaagcgatcgacatg
tacgccgcctacaacgagatggacgaggcgcgcttcgtggtcgaacgcctgcgccagtgg
gtgcgcgacggcggcagctacggcgacgtcgccgtgctctaccgcagcaacgcgcaatcg
cgcgcctacgaagaggccctgctgtcggaacaggtgccgtaccgggtctacggcggccag
cgcttcttcgagcgcgccgaaatcaaggacaccctggcctatctgcgcatgatcgccaac
cgcgccgacgacgccgccttcgagcgcgcggtcaacacgcccacccgcggcatcggcgag
cgcaccctcgacgaggtgcgcaagcgcgcccgcgccgatgcggtctcgctgtgggaggcg
gcgcggcggatctcgcaggagaacgggctcgccgcgcgcgcccgcaacgccctggccggg
ttcgccctgctgatcgacacgctggaaagcgacgtagtcgagatgccgctgccggagaag
atcgatcacatcctgcagcgttcgggcctgcgcgagcactacgccaacgaatcgcgcggc
caactcgattcgcgcaccgacaacctcgacgaactggtctcggtggcctcgcgtttcacc
cgcaccgacgaggacgaggccgcggcgatgccggagctgatcgccttcctcagctacgcc
gcgctcgaggccggcgaaggccaggcccaggccggcgaggacggcgtgcagctgatgacc
ttgcacagcgccaagggactggagtttccgttggtgttcctcggcggcctggaagagggc
ctgttcccgagcgggcgttcgaccgaggagtccgggcgcctggaggaagagcgccgcctg
gcctatgtcggcatcacccgtgcgcgcgagaagctggtgctcagctatgccgagacccgc
cgcatccatggcatggacatgttcggggtgccctcgcgcttcctgcgcgagattccgccg
gccctgctcaacgaagtgcggccgaaggtgcaggtgtcgcgtccggtttacggcgccggc
ccgcgccgcgccgactacggccatgccgcgatcgaggcgccgccggtcaagctcggctcg
caggtgcgccatgccagcttcggcaccggcacggtgaccgactacgaaggcaccggcgcg
cacgcgcgggtgcaggtcaacttcgacgacgccggcagcaaatggctggtattggcctat
gcgaacctgcagccactctag
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