Lysobacter antibioticus 76: LA76x_1678
Help
Entry
LA76x_1678 CDS
T04154
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
lab
Lysobacter antibioticus 76
Pathway
lab00521
Streptomycin biosynthesis
lab00523
Polyketide sugar unit biosynthesis
lab00525
Acarbose and validamycin biosynthesis
lab00541
Biosynthesis of various nucleotide sugars
lab01100
Metabolic pathways
lab01110
Biosynthesis of secondary metabolites
lab01250
Biosynthesis of nucleotide sugars
Module
lab_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
lab00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LA76x_1678 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LA76x_1678 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
LA76x_1678 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LA76x_1678 (rfbB)
00525 Acarbose and validamycin biosynthesis
LA76x_1678 (rfbB)
Enzymes [BR:
lab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
LA76x_1678 (rfbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
Motif
Other DBs
NCBI-ProteinID:
ALN79834
UniProt:
A0A0S2F8G2
LinkDB
All DBs
Position
1897681..1898718
Genome browser
AA seq
345 aa
AA seq
DB search
MTGGAGFIGGNFVLDAVRKGVEVVNLDALTYAGNLDTLSSLDGNPNHVFIQGDIGDAALL
KRLLAEHRPEAVVNFAAESHVDRSIEGPAAFVQTNVVGTLSLLEQVRDYWKQLDAPARDA
FRFLHVSTDEVYGSLGDTGKFTETTPYAPNSPYSASKAASDHLVRAFHHTYGLPVLTTNC
SNNYGPFQFPEKLIPLIIAKALAGEPLPVYGDGLNVRDWLFVGDHCAAISRVLETGRIGE
TYNVGGDAERANIVVVKTICALLDARRPLADGRARESLIAYVADRPGHDRRYAIDADKLK
DELGWAPTVTFEEGIARTVDWYLGNQAWVQRVLDGSYRLERIGQA
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
gtgaccggcggcgccggattcatcggcggtaacttcgttctcgatgcggtccgcaaaggg
gtcgaggtcgtcaatctcgacgccctgacttatgcgggcaatctcgacaccctcagcagc
ctggacggcaacccgaaccacgtgttcatccagggcgacatcggcgatgccgccctgctc
aagcgtctgctggccgagcaccgcccggaggcggtggtcaatttcgccgccgaaagccac
gtcgaccgctcgatcgaaggtccggcggcgttcgtgcagaccaacgtcgtcggcaccctg
agcctgctcgagcaggtgcgcgactactggaagcagctcgatgcgccggcccgcgacgcg
ttccgtttcctgcacgtgtcgaccgacgaggtctacggcagtctcggcgacacgggcaag
ttcaccgagaccacgccgtatgcgccgaactcgccgtactcggcctccaaggccgcttcc
gatcatctggtgcgggcgttccaccacacctacggtctgccggtgctgaccacgaattgc
tcgaacaactacgggccgttccagttcccggagaaactcatcccgctgatcatcgccaag
gcgctggccggcgagccgctgccggtctacggcgacggcctcaacgtccgcgactggttg
ttcgtcggcgatcactgcgcggcgatttcgcgcgtgctcgaaaccggccgcatcggcgag
acctacaacgtcggcggcgatgccgagcgggcgaacatcgtcgtggtcaagacgatctgc
gcgctgctcgacgcgcgccgcccgctcgccgacggccgtgcccgcgaatcgttgatcgcc
tatgtcgccgaccgcccgggccacgatcgccgttacgcgatcgatgccgacaagctcaag
gacgagctcggctgggcgcccacggtcacttttgaagagggcatcgcccgtacggtcgac
tggtacctcggcaaccaggcctgggtgcagcgcgtgctcgacggcagctatcgactggaa
cgcatcggccaggcctga
DBGET
integrated database retrieval system