Lysobacter antibioticus 76: LA76x_1680
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Entry
LA76x_1680 CDS
T04154
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
lab
Lysobacter antibioticus 76
Pathway
lab00521
Streptomycin biosynthesis
lab00523
Polyketide sugar unit biosynthesis
lab00541
Biosynthesis of various nucleotide sugars
lab01100
Metabolic pathways
lab01110
Biosynthesis of secondary metabolites
lab01250
Biosynthesis of nucleotide sugars
Module
lab_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
lab00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LA76x_1680 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LA76x_1680 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LA76x_1680 (rfbC)
Enzymes [BR:
lab01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LA76x_1680 (rfbC)
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Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ALN79836
UniProt:
A0A0S2F8G0
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All DBs
Position
1899637..1900194
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AA seq
185 aa
AA seq
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MKVIETDLPGCLVVEPRVFADSRGFFYESFNHDKLAEYGLAPQFVQGNVSSSSRGVLRGL
HYQWPKPQGKYISVIEGEVWDVAVDIRRGSPHYGRWTAVVLSAENKRHMWIPEGFAHGFV
TLSERAIFSYLCTQTYDASADAAIRWDDPDLAIDWPVSDPSLSAKDAAAPLLKDVVEDRL
PVYTP
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcatcgaaaccgatctgcccggctgcctcgtcgtcgaaccgcgggtgttcgct
gactcgcgcggcttcttctatgaatcgttcaaccacgacaagctcgccgagtacggcctg
gcgccgcagttcgtgcaaggcaatgtttcctcgtcgtcgcgtggcgtgctgcgcgggttg
cactatcaatggccgaagccgcaaggcaagtacatctcggtgatcgaaggagaggtctgg
gacgtggcggtggatattcgccgcggttcgccgcactacgggcgttggaccgcggtcgtt
ctgagcgccgagaacaagcggcatatgtggattccagagggtttcgcgcatggcttcgtc
acgttgagcgagcgggcgatcttcagttacctgtgtacgcaaacctacgatgcgagcgct
gatgcggcgattcgttgggacgatccggacctcgccatcgactggccggtcagcgatccg
tccttgtccgctaaagacgccgccgctcccttgctcaaggacgtcgtcgaagaccgcctg
ccggtctacacgccatga
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