Lysobacter antibioticus 76: LA76x_1742
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Entry
LA76x_1742 CDS
T04154
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
lab
Lysobacter antibioticus 76
Pathway
lab03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LA76x_1742 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lab03400
]
LA76x_1742 (uvrB)
DNA repair and recombination proteins [BR:
lab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LA76x_1742 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LA76x_1742 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
DUF87
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ALN79897
UniProt:
A0A0S2F8K9
LinkDB
All DBs
Position
1963054..1965084
Genome browser
AA seq
676 aa
AA seq
DB search
MDDSAQSPGFQLVAPYSPAGDQPQAIERLIQGFDNGLAQQTLLGVTGSGKTYTVANVIQA
VQKPTLVMAPNKTLAAQLYGEFKAFFPHNAVEYFVSYYDYYQPEAYVPSSDTFIEKDSSV
NEHIEQMRLSATKALLERRDAIIVCTVSAIYGLGDPNEYFRMVLHMVRGERIDQRELIRR
LTEMQYTRNDTELRRATYRVRGEVIDVHPAESDSEALRVELFDGEIENLTLFDPLTGETL
SKVPRYTIYPGSHYVTTRRTVLDAIETIKDELRERLELLYAQNRLVEAQRLAQRTQFDLE
MLAEVGYCNGIENYSRHLSGHMPGEPPPCLFDYLPPDALLVIDESHVTIPQIGAMYKGDR
SRKETLVEFGFRLPSALDNRPLKFEEWEGRSPRSIFVSATPGPYELRKSEGQVTELVVRP
TGLIDPEVEIRPVATQVDDVLGEIRERVAMGDRVLITTLTKRMSENLTEYLAEHGVKVRY
LHSDIDTVERVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSAGSL
IQTIGRAARNLRGKAILYADRVTNSMQKAIEETDRRRHKQVEYNTEHGITPKSVSKTIVD
VMEGARVDPDGLKARGKGRKVADEAADYAALSPSQFAARIKALEQQMYQHARDLEFEEAA
AVRDQLRRLKDAGFAA
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggacgactccgcccagtcccccggtttccagctggtcgcgccttactcgcccgcgggc
gatcaaccgcaggccatcgagcgcctgatccaggggttcgacaacggcctggcccagcag
accctgctcggcgtgaccggttcgggcaagacctatacggtcgccaacgtgatccaggcg
gtgcagaagccgaccctggtgatggccccgaacaagaccctcgccgcgcagctgtacggc
gagttcaaggcgttcttcccgcataacgcggtcgagtacttcgtcagttattacgattat
taccagcccgaggcctacgtgccctcgagcgacaccttcatcgagaaggacagctcggtc
aacgagcacatcgagcagatgcgcctgtccgcgaccaaggccctgctcgaacgccgcgac
gcgatcatcgtctgcaccgtgtcggcgatctatggcctgggcgacccgaacgaatatttc
cgcatggtcctgcacatggtccggggcgagcgcatcgaccagcgcgagctgattcgacgc
ctgaccgaaatgcagtacacccgcaacgacaccgaactgcgtcgcgcgacctaccgcgtg
cgcggcgaggtcatcgacgtgcatccggccgaaagcgactcggaggccctgcgcgtcgag
ctgttcgacggcgagatcgagaacctgaccttgttcgacccgctgaccggcgaaaccttg
agcaaggtcccgcgttacacgatctatcccggttcgcattacgtgacgacccggcgcacg
gtgctcgatgcgatcgaaacgatcaaggacgaattgcgcgagcgcctggagctgctgtac
gcgcagaaccggctggtcgaagcccagcgcctggcccagcgcacccagttcgatctggag
atgctggccgaggtcggttattgcaacggcatcgagaactactcgcggcacctcagcggg
cacatgcccggcgaaccgccgccgtgcctgttcgactatctgccgccggacgctctgctg
gtcatcgacgaatctcacgtgaccattccgcagatcggcgccatgtacaagggcgaccgc
tcgcgcaaggaaaccctggtcgaattcggtttccgcctgccgtcggcgctcgacaaccgg
cccttgaagttcgaagagtgggagggtcgttcgccgcgctcgatcttcgtctcggcgacg
ccggggccgtacgaattgcgcaagtcggaagggcaggtgaccgagctggtggtgcgcccg
accggtctgatcgatcccgaggtcgagatccggccggtcgcgacccaggtcgacgacgtg
ctcggcgaaatccgcgaacgcgtcgccatgggcgaccgcgtgttgatcacgaccctgacc
aagcgtatgtcggaaaacctcaccgagtatctcgccgagcacggggtcaaggtgcgttac
ctgcattccgacatcgatacggtcgagcgcgtcgagatcatccgcgacctgcgcctgggc
aagttcgacgtgttggtcggcatcaatctgctgcgcgagggcctggatatgcccgaggtg
tcgctggtggcgatcctcgacgccgacaaggagggcttcctgcgttcggccggttcgctg
atacagaccatcggccgcgccgcgcgcaacctgcgcggcaaggcgatcctgtacgccgac
cgcgtgaccaattcgatgcagaaggcgatcgaggagaccgaccgccgccgccacaagcag
gtcgagtacaacaccgaacacggcatcacccccaagtcggtcagcaagaccatcgtcgac
gtcatggaaggcgcgcgcgtcgacccggacggcctcaaggcccgcggcaaggggcgcaag
gtcgccgacgaggccgccgactacgccgcgctcagtccgtcccagttcgccgcccggatc
aaggccctggagcagcagatgtaccagcacgcccgcgacctggagttcgaggaggccgcg
gcggtgcgcgaccagttgcgccggctcaaggacgccgggttcgcggcctga
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