Lysobacter antibioticus 76: LA76x_2061
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Entry
LA76x_2061 CDS
T04154
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
lab
Lysobacter antibioticus 76
Pathway
lab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LA76x_2061 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lab03019
]
LA76x_2061 (pcnB)
Enzymes [BR:
lab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
LA76x_2061 (pcnB)
Messenger RNA biogenesis [BR:
lab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LA76x_2061 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
ALN80200
UniProt:
A0A0S2DV38
LinkDB
All DBs
Position
2311584..2312924
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AA seq
446 aa
AA seq
DB search
MQADNSSFHTSLRVIPRDQHNVSRKEISPNALRVLYRLRDSGFGAFLVGGAVRDILVGGH
PKDFDVATDATPEQVKGLFRNCRLIGRRFRLAHVVYGREIIEVATFRANIDDGSGDRETD
TGGRLVRDNVYGSIEDDAVRRDFTANALYYAVEDFSVRDYVGGFEDVQNRLMRLIGDPET
RYREDPVRMLRAVRLAAKLGFEIEAATAAPIPHLAPLLADAAPARLFEECLKLFLSGHAV
ESFLGLERFGLLSALLPESAAALKSNRSGALRRMVLEGLKGTDARVANDEPVSPAFLFAL
LLWPAYCRDLMGLQAQGVHTAEAQRRAADRVTLHQLSTIALPRRFSLPMQEIWLLQSRFQ
QRQRKRVFRLLSHPRFRAAFDFLSLRMAASDEHAADVEFWREAQQHPGELLAHQEAHAHL
DDEEGGEDRAPRKRRRRRRGAPTASE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgcaagccgataactcttcattccatacctcgctgcgcgtgatcccgcgcgaccagcac
aatgtctcgcgcaaggagatcagtccgaacgcgcttcgcgtgctgtatcggctgcgcgac
agcggcttcggcgccttcctggtcggtggcgccgtgcgcgacatcctggtcggcggtcat
cccaaggacttcgacgtcgccaccgacgccacgccggagcaggtcaagggcctgttccgc
aactgccggctgatcggccgccggttccgcctggcgcacgtggtctacggccgcgagatc
atcgaggtcgcgaccttccgtgccaacatcgacgacggcagcggcgaccgcgagaccgac
accggcggccgcctggtccgcgacaacgtctacggcagcatcgaggacgacgcggtccgc
cgcgacttcaccgccaatgcgctgtattacgcggtcgaggatttctcggtgcgcgactac
gtcggcggcttcgaggacgtgcagaaccgcctgatgcgcctgatcggcgatccggaaacg
cgttatcgcgaagacccggtgcggatgctgcgcgcggtgcgcctggcggccaagctcggt
ttcgagatcgaggcggccaccgccgcgccgatcccgcatctggcgccgttgctcgccgat
gccgcgccggcgcggttgttcgaggaatgcctcaagctattcctgtccggccatgcggtc
gagagcttcctcggcctggagcgtttcggattgctgtcggcgctgttgccggaaagtgcg
gcggccttgaagtccaaccgcagcggcgccctgcgccggatggtgctggaagggctgaag
ggcaccgacgcgcgcgtcgccaacgacgagccggtctcgcccgcgttcctgttcgcgttg
ttgctgtggccggcgtattgccgcgacctgatgggtctgcaggcgcagggcgtgcacacc
gccgaagcgcagcgccgcgccgccgaccgggtcaccttgcaccagttgtcgacgatcgcg
ctgccgcgccgcttctcgctgccgatgcaggagatctggctgctgcagtcgcgtttccag
cagcgtcagcgcaagcgcgtgttccggctgttgtcgcacccgcgtttccgcgccgccttc
gatttcctctcgctgcgcatggccgcatcggacgagcacgccgccgacgtcgagttctgg
cgcgaggcgcagcagcatccgggcgagctgctcgcgcaccaggaggcgcatgcgcacctg
gacgacgaggagggcggcgaggatcgcgccccgcgcaaacgccgtcgccgccgtcgcggc
gcgccgaccgcatcggagtga
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