Lysobacter antibioticus 76: LA76x_2094
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Entry
LA76x_2094 CDS
T04154
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
lab
Lysobacter antibioticus 76
Brite
KEGG Orthology (KO) [BR:
lab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lab03009
]
LA76x_2094 (rimO)
Enzymes [BR:
lab01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LA76x_2094 (rimO)
Ribosome biogenesis [BR:
lab03009
]
Prokaryotic type
ribosomal protein modification factors
LA76x_2094 (rimO)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
ALN80233
UniProt:
A0A0S2F9L4
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All DBs
Position
2347270..2348628
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AA seq
452 aa
AA seq
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MSSASVSPANPKVGFVSLGCPKALVDSERILTQLRVEGYDIVQTYDAADVVVVNTCGFID
SAVTESLDAIGEAIAENGKVIVTGCLGKRSELIREAHPGVLSISGPQDYGSVMSAVHAAL
PPKHDPFIDLVPRRDDGIGVKLTPKHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPVDEV
LREAEKLAMGGVKELLVISQDTSAYGVDVKYAEREWRGKSYQTRMKALCEGLSELGIWTR
LHYVYPYPHVDDIIPLMADGKLLPYLDIPFQHASPRVLKLMKRPGAVDKTLERIQRWRSI
APDIAIRSTFIVGFPGETEQEFEELLDFLDEAQLDRVGAFAYSPVDGAKANDLPDPVDED
VKQERLARFMERQAEISAAKLEAKVGSIQRCLIDAIDGDLAIARSMADAPEIDGLVQIQN
GLEAQLRVGQFVDVEIMGSDEHDLFGEAVEQD
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccgccagcgtctcgccagccaatcccaaagtcggtttcgtcagtctcggttgc
cccaaggcgctggtcgattcggaacgcatcctcacccagttgcgggtcgagggttacgac
atcgtccagacctacgacgccgccgacgtggtggtggtcaacacctgcggcttcatcgac
tcggcggtgaccgaatcgctggacgcgatcggcgaggccatcgccgagaacggcaaggtc
atcgtcaccggctgcctcggcaagcgctcggagctgatccgcgaagcgcatcccggggtg
ctgtcgatcagcggcccgcaggactacggcagcgtgatgagcgcggtgcacgcggcgctg
ccgccgaagcacgacccgttcatcgacctggtgccgcgccgcgacgacggcatcggcgtc
aagctcacgcccaagcactacgcttatctgaagatttccgaaggctgcaatcaccgctgc
agcttctgcatcattccgtcgatgcgcggcgatctggtctcgcgtccggtcgacgaggtg
ttgcgcgaagccgaaaagctggcgatgggcggggtcaaggagctgctggtgatctcgcag
gacacctcggcctacggcgtcgacgtcaaatacgccgagcgcgaatggcgcggcaagtcc
taccagacccgcatgaaggcgctgtgcgaaggcctcagcgaactcggcatctggacgcgc
ctgcactatgtgtatccgtacccgcacgtcgacgacatcatccccttgatggccgacgga
aaattgctgccgtacctcgatatcccgttccagcacgccagcccgcgcgtgctcaagctg
atgaagcgccccggcgcggtcgacaagaccctcgagcgcatccagcgctggcgctcgatc
gccccggacatcgcgatccgcagcaccttcatcgtcggtttcccgggtgagaccgagcag
gagttcgaggaactgctcgacttcctcgacgaggcccagctcgaccgcgtcggcgccttc
gcctattcgccggtcgacggcgccaaggccaacgatctgcccgacccggtcgacgaagac
gtcaagcaggagcgtctggcgcgtttcatggagcgccaggccgagatttccgcggccaag
ctcgaagccaaggtcggcagcatccagcgttgcctgatcgacgccatcgacggcgacctc
gccatcgcccgttcgatggccgatgcgcccgagatcgacggcctggtgcagatccagaac
ggcctcgaagcgcagctgcgcgtcggccaattcgtcgacgtcgagatcatgggcagcgac
gaacacgacctgttcggcgaagccgtcgaacaggattga
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