Lysobacter antibioticus 76: LA76x_2196
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Entry
LA76x_2196 CDS
T04154
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
lab
Lysobacter antibioticus 76
Pathway
lab00020
Citrate cycle (TCA cycle)
lab00190
Oxidative phosphorylation
lab00650
Butanoate metabolism
lab00720
Other carbon fixation pathways
lab01100
Metabolic pathways
lab01110
Biosynthesis of secondary metabolites
lab01120
Microbial metabolism in diverse environments
lab01200
Carbon metabolism
Module
lab_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lab_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
lab_M00149
Succinate dehydrogenase, prokaryotes
lab_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
lab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LA76x_2196 (sdhA)
00650 Butanoate metabolism
LA76x_2196 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
LA76x_2196 (sdhA)
00720 Other carbon fixation pathways
LA76x_2196 (sdhA)
Enzymes [BR:
lab01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
LA76x_2196 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
Thi4
DAO
GIDA
HI0933_like
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
ALN80335
UniProt:
A0A0S2F9W0
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All DBs
Position
2503267..2505060
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AA seq
597 aa
AA seq
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MASAYKIQEHKFDMVVVGAGGAGLRATFGLAQKGLKTACITKVFPTRSHTVAAQGGISAA
LGNMGEDDWRYHFFDTVKGSDWLGDQDAIEYMCKEAIPAIIELEHQGVPFSRTDEGKIYQ
RPFGGMTTKYGEGPPAQRTCAAADRTGHAILHTLYQQSLAHDAQFFIEYFALDLIMDETG
ACRGVLALDMAEGTLHLFRAQGTVLATGGYGRAYFSATSAHTCTGDGGGMALRAGLGLQD
MEFVQFHPTGIYGAGCLITEGVRGEGGILRNANGERFMERYAPSVKDLAPRDMVSRSMTI
EIREGRGVGEHKDHILLDLTHLGPEVIHEKLPGIAESARIFANVDVEKEPIPVIPTVHYN
MGGIPTNYHGEVVQLKNGNPDAVVPGLYAIGEAACVSVHGANRLGSNSLLDLVVFGRAVA
NRCAETVTPGGAHARLAGDACDEALARLDKLRNATGGTPTAVIRDKMQRTMQADAAVFRT
GETLSEGVRKMREIHASFADVKVSDRSLIWNSDLIETYELSNLLGQALATIVSAENRTES
RGAHAREDFATRNDEEWQKHTLCWVDEKGTTSIDYRPVHNYTLTDDVAYVPPKERKY
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
gtggcctctgcctacaagattcaagaacacaagttcgacatggtcgtggtcggcgccggc
ggcgccggtctgcgcgccaccttcggtctcgcccagaagggcttgaagaccgcctgcatc
accaaggtgttcccgacccgttcgcacaccgtcgccgcccagggcggcatctcggccgcg
ctcggcaacatgggcgaggacgactggcgctatcacttcttcgacaccgtcaagggctcg
gactggctgggcgaccaggacgcgatcgagtacatgtgcaaggaggccatcccggccatc
atcgagctcgagcaccagggcgtgccgttctcgcgcaccgacgaaggcaagatctaccag
cgcccgttcggcggcatgaccaccaagtacggcgaaggcccgccggcgcagcgcacctgc
gccgccgccgaccgcaccggccacgccatcctgcacaccctgtaccagcagtcgctggcg
cacgacgcgcagttcttcatcgagtacttcgccctcgacctgatcatggacgagaccggc
gcctgccgcggcgtgctcgcactcgacatggccgaaggcaccctgcacctgttccgcgcc
cagggcacggtgctggctaccggcggttacggccgtgcctatttctcggcgacctcggcg
catacctgcaccggcgacggcggcggcatggcgctgcgcgccggcctcggcctgcaggac
atggaattcgtccagttccacccgaccggcatctacggcgccggctgcctgatcaccgag
ggcgtgcgaggcgagggcggcattttgcgcaacgccaacggcgagcgtttcatggagcgc
tatgcgccgagcgtgaaagaccttgcgccgcgcgacatggtcagccgttcgatgaccatc
gagatccgcgaaggccgcggcgtcggcgagcacaaggaccacatcctgctcgacctgacc
cacctcggccccgaggtcatccacgagaagctccccggcatcgccgaatcggcgcgcatc
ttcgccaacgtcgatgtcgagaaagagccgatcccggtcatcccgaccgtgcactacaac
atgggcggcatcccgaccaactaccacggcgaagtcgtgcagttgaagaacggcaacccc
gatgcggtcgtgccgggcctgtacgcgatcggcgaagcggcctgcgtgtcggtgcacggc
gccaaccgcctgggctcgaactcgctgctcgatctggtggtgttcggccgtgcggtggcc
aaccgctgcgccgagacggtcacgcccggcggcgcccacgcgcgtctggccggcgatgcc
tgcgacgaggcgctggcgcgcctggacaagttgcgcaacgccaccggcggcaccccgacg
gcggtcattcgcgacaagatgcagcgcaccatgcaggccgacgcggcagtgttccgcacc
ggcgagacgctcagcgagggcgtgcgcaagatgcgcgagatccacgcttcgttcgccgac
gtcaaggtcagcgaccgttcgctgatctggaactcggacctgatcgagacctacgagctg
tcgaacctgctcggccaggccttggccacgatcgtctcggccgagaaccgcaccgagtcg
cgcggcgcccacgcccgcgaggacttcgccacgcgcaacgacgaagagtggcagaagcac
acgctgtgctgggtcgacgagaagggtacgacgagcatcgactaccgtccggtgcacaac
tacaccttgaccgacgacgtcgcctacgtcccgcccaaggaacgcaagtactga
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