Lysobacter antibioticus 76: LA76x_2541
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Entry
LA76x_2541 CDS
T04154
Name
(GenBank) exonuclease family protein
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
lab
Lysobacter antibioticus 76
Pathway
lab03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LA76x_2541
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lab03400
]
LA76x_2541
Enzymes [BR:
lab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
LA76x_2541
DNA repair and recombination proteins [BR:
lab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LA76x_2541
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LA76x_2541
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LA76x_2541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ALN80671
UniProt:
A0A0S2FAU2
LinkDB
All DBs
Position
complement(2855011..2856462)
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AA seq
483 aa
AA seq
DB search
MPASFLFYDLETFGADPRTTRIAQFAAIRTDADLNPIEEPISVFVKPADDLLPSPVATLI
TGIAPQDALRDGVSEAEIFALISDEMSRPETCSAGYNSLRFDDEFVRYGLFRNFYDPYER
EWRGGNSRWDLLDVMRLAHALRPEGVVWPQREDGTTSFKLEHLAEANGVREGDAHEALSD
VRALIGIARKFKTAQPKLWEYALRLRDKRFAATLLDTIAMTPALHVSQRYPASRLCAAPV
IPLARHPRIDNRVLVFDLVQDPAALLRLAPDEIADRLYTPTADLPEGEERVALKEVHLNR
CPALIAWNHLRPADFERLSIDPAQVEYRAAQIREAGPELVEKVRRVYANDRAREPSDVDA
SLYDAFIGDGDKRLFRQVRTTPPQALAQAAFDFRDARLPELLFRYRARNWPQTLDAQERG
RWDDYRRRRLYDEAGLSEYSFERFRAELAQTRALAGADGGKQALLDRLEAWAGDIDAGLK
PAL
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccagttttctgttctacgacctcgaaaccttcggcgccgacccgcgcacaacc
cgcatcgcccagttcgcggcgatccgcaccgacgccgatctgaatccgatcgaggagccg
atcagcgtcttcgtcaagcccgccgacgatctgctgccctcgccggtggcgaccctgatc
accgggatcgcgccgcaggacgccctgcgcgacggtgtcagcgaggccgagatcttcgcc
ctgatctccgacgagatgtcgcggccggagacctgcagcgccggctacaactcgctgcgc
ttcgacgacgagttcgtccgctacggtctgttccgcaatttctacgacccttacgaacgc
gaatggcgcggcggcaattcgcgctgggacttgctcgacgtgatgcgcctggcccacgcc
ttgcgccccgagggcgtggtctggccgcaacgcgaagacggcaccacctcgttcaaactc
gaacacctggccgaagccaacggcgtgcgcgaaggcgatgcccacgaagcactgtcggac
gtgcgcgccctgatcggcatcgcgcgcaagttcaagaccgcgcagccgaagctatgggag
tacgccctgcgcctgcgcgacaagcgcttcgccgcgaccttgctcgacaccatcgcgatg
accccggccctgcacgtctcgcagcgctacccggccagccgcctgtgcgcggcgccggtg
atcccactggcgcggcatccgcgcatcgacaaccgcgtgctggtgttcgacctggtgcaa
gaccctgcggcgctgttgcggttggcgccggacgagatcgccgaccgcctgtacacgccg
accgccgacctgcccgaaggcgaggaacgcgtcgcgctcaaggaagtgcatctgaaccgc
tgcccggcgctgatcgcctggaaccacctacgcccagccgatttcgaacgtttatcgatc
gacccggcccaggtcgagtatcgcgccgcgcagatccgcgaagccggtccggaactggtc
gagaaagtccgccgtgtctacgccaatgaccgtgcccgcgaaccctccgacgtcgacgct
tcgctgtacgacgccttcatcggcgacggcgacaagcgcctgttccgccaggtgcgcacc
accccgccacaagcgctggcccaggccgccttcgatttccgcgacgcccgcctgccggaa
ctgctgttccgttatcgcgcccgcaattggccgcagaccctggacgcgcaagaacgcgga
cgctgggacgactaccgccgccgccgtctgtacgacgaggccggcctgtccgagtacagc
ttcgagcgcttccgcgccgagctggcgcagacccgcgcgctcgccggcgccgacggcggc
aagcaggctttgctcgaccgcctggaagcctgggccggcgatatcgacgccggcttgaag
cccgccctgtaa
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