Lysobacter antibioticus 76: LA76x_2961
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Entry
LA76x_2961 CDS
T04154
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
lab
Lysobacter antibioticus 76
Pathway
lab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LA76x_2961 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lab03019
]
LA76x_2961 (pnp)
03016 Transfer RNA biogenesis [BR:
lab03016
]
LA76x_2961 (pnp)
Enzymes [BR:
lab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LA76x_2961 (pnp)
Messenger RNA biogenesis [BR:
lab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LA76x_2961 (pnp)
Transfer RNA biogenesis [BR:
lab03016
]
Prokaryotic type
tRNA degradation factors
LA76x_2961 (pnp)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
OB_RRP5_4th
KH_2
KH-I_KHDC4-BBP
S1_2
KH_KhpA-B
S1CSD-TOTE-1
KH_5
Motif
Other DBs
NCBI-ProteinID:
ALN81091
UniProt:
A0A0S2FC63
LinkDB
All DBs
Position
complement(3440564..3442672)
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AA seq
702 aa
AA seq
DB search
MAKITKTFQYGNHQVTLETGEIARQAGGAVIVKMEDTVLLVTAVAAKSAREGQDFFPLTV
DYQEKFYAGGRIPGGFFKREGRATEKETLISRLIDRPIRPLFPEDYRNEVQIIATVMSMN
PEIDGDIPALIGASAALALAGTPFQGPIGAAKVGYKNGQYLLNPTAAELAESELELVVAG
TSNAVLMVESEAKMLSEDVMLGAVMFGHREMQKVINIINELVVEAGTKPSTWEAPVKNEA
LIAALKEAVGDQLVSAFQVRDKLQRRDAIGAIKKDVLQRLAGRAEADGWSTSELSKEFGE
LEYQTMRNSVLDTKVRIDGRALDTVRPIASRVGVLPRTHGSSLFTRGETQAIVVATLGTA
RDGQIIDAVSGEYKEHFLFHYNFPPYSVGEAGRMMGPKRREIGHGRLAKRGVLAVMPTME
EFPYTIRIVSEITESNGSSSMASVCGSSLALMDAGVPIKAPVAGIAMGLVKEGDNFVVLS
DILGDEDHLGDMDFKVAGTSEGISALQMDIKIQGITEEIMKVALGQAKAGRLHILGEMAH
ALTESRTELSEYAPRLLTMKIHPDKIREVIGKGGSTIQAITKETGTQIDIQDDGTIVIAS
VNAAAAQAAKARIDQIVSDVEPGRIYEGKVAKIMDFGAFVTILPGKDGLVHVSQISNERV
EKVSDKLKEGDVVKVKVLEVDKQGRIRLSMKAVEEGEGVVAE
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaaattaccaagaccttccaatacggcaaccatcaggtgaccctggagaccggc
gaaatcgcccgtcaggccggcggcgccgtcatcgtgaagatggaggacaccgtgttgctg
gtgacggccgtcgccgccaagagcgcgcgcgaaggccaggacttcttcccgctcaccgtg
gattaccaagagaagttctacgccggcggtcgcatcccgggcggcttcttcaagcgcgaa
ggccgtgcgaccgagaaggaaacgctgatctcgcgcctgatcgaccgtccgatccgtccg
ctgttcccggaggactaccgtaacgaagtccagatcatcgccacggtcatgtcgatgaat
ccggaaatcgacggcgacatcccggccctgatcggtgcctcggccgcgctcgcgctggcc
ggcaccccgttccagggcccgatcggcgcggccaaggtcggttacaagaacggccagtac
ctgctcaacccgaccgccgccgagctggccgaatccgagctcgagctcgtcgtcgccggt
acctcgaacgcggtgctgatggtcgaatccgaagccaagatgctgtccgaggacgtcatg
ctcggcgcggtgatgttcggccatcgcgaaatgcagaaggtcatcaacatcatcaacgag
ctcgtcgtcgaagccggcaccaagccgtcgacgtgggaagctccggtcaagaacgaagcg
ctgatcgccgcgctcaaggaagccgtgggcgaccagctcgtttcggcgttccaggtgcgc
gacaagctgcagcgtcgcgacgccatcggcgcgatcaagaaggacgtgctgcagcgcctg
gccggccgcgccgaagccgacggctggagcacctcggagctgtcgaaggaattcggcgag
ctcgagtaccagaccatgcgcaactcggtgctcgacaccaaggtccgcatcgacggccgc
gccctcgacaccgtgcgcccgatcgcttcgcgcgtcggcgtgctgccgcgtacccacggc
tcctcgctgttcacccgcggcgagacccaggccatcgtggtcgccaccctcggcaccgcg
cgcgacggtcagatcatcgacgccgtctcgggcgagtacaaggaacacttcctgttccat
tacaacttcccgccttactcggtcggcgaagccggccgcatgatgggcccgaagcgtcgc
gaaatcgggcacggccgcctcgccaagcgcggcgtgctcgccgtgatgccgacgatggaa
gaattcccgtacaccatccgcatcgtctcggaaatcaccgagtcgaacggttcgtcctcg
atggcttcggtctgcggcagctcgctggcgctgatggatgccggcgtgccgatcaaggcg
ccggtcgccggcatcgcgatgggcctggtcaaggaaggcgacaacttcgtcgtcctgtcg
gacatcctgggcgatgaagatcacctcggcgacatggacttcaaggtggccggcacttcc
gagggcatctcggcgctgcagatggacatcaagatccagggcatcaccgaagaaatcatg
aaggtcgcgctgggccaggcgaaggccggccgtctgcacatcctcggcgagatggctcac
gccctcaccgagtcgcgcaccgagctgtccgagtacgcgccgcgtctgctgaccatgaag
atccacccggacaagatccgcgaagtgatcggcaagggcggctcgaccatccaggcgatc
accaaggaaaccggcacccagatcgacatccaggacgacggcaccatcgtcatcgcttcg
gtcaacgccgccgccgcgcaggccgcgaaggcgcgcatcgaccagatcgtgtccgacgtc
gagccgggccgcatctacgaaggcaaggtcgccaagatcatggacttcggcgccttcgtg
acgatcctgccgggcaaggacggtctggtccacgtttcgcagatctccaacgagcgcgtc
gagaaggtcagcgacaagctcaaggaaggcgacgtggtcaaggtcaaggtgctggaagtc
gacaagcagggccgtatccgcctgtcgatgaaggccgtcgaagaaggcgagggcgtcgtc
gccgagtaa
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