Lysobacter antibioticus 76: LA76x_2965
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Entry
LA76x_2965 CDS
T04154
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lab
Lysobacter antibioticus 76
Brite
KEGG Orthology (KO) [BR:
lab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lab03016
]
LA76x_2965 (truB)
Enzymes [BR:
lab01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LA76x_2965 (truB)
Transfer RNA biogenesis [BR:
lab03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LA76x_2965 (truB)
Prokaryotic type
LA76x_2965 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
ALN81095
UniProt:
A0A0S2FC18
LinkDB
All DBs
Position
complement(3444082..3445014)
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AA seq
310 aa
AA seq
DB search
MNTTRKRNWRNVDGLLLLDKPPGISSNQALQQARHLFRAEKGGHTGSLDPLATGLLPLCF
GEATKIAGLLLGARKAYSATAVLGLTTDSDDADGAPLLERPVPEFDDAAIEAALAPLRGP
IRQRAPIYSALKQGGEPLYAKARRGEVIEAPERDVVVHSLTVTGRDGPRLELHIECGSGT
YVRSLVRDLGEALGCGAHVATLRRLWVEPFMQPRMITLEALRELAEQGSDLALDACLLPI
EAGLTGFGRVSLDSTAAERLGHGQAVSCEPGEPGLVAVFGEAGRCLGLGLRQAEGRLQPQ
RLFRWAAQGG
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
ttgaacacgacgcgtaaacgcaattggcgcaacgtcgacggcttgctgctgctcgacaag
ccccccggcatcagctccaaccaggcgctgcagcaggcacgtcatctgttccgtgcggag
aagggcggccacaccggcagtctcgacccgctcgcgaccggtctgctgccgttgtgcttc
ggcgaggcgaccaagatcgccgggctgttgctcggcgcacgcaaggcctacagcgcgacc
gcggtgctgggcctgaccaccgacagcgacgacgccgacggcgcgcccctgctcgaacgt
ccggtacccgaattcgacgatgcggcgatcgaagccgccctggcgcccttgcgcggcccg
atccgccagcgcgcgccgatctattccgcgctcaagcagggcggcgaaccgctgtacgcg
aaggcccgccgcggcgaggtcatcgaggcgcccgagcgcgacgtcgtcgtccactctttg
accgtgaccggccgcgacggcccgcgcctggagctgcatatcgaatgcggctccggcacc
tatgtgcgcagcctggtccgcgacctcggcgaggcgctcggctgcggcgcccacgtggcg
accttgcgccggctctgggtcgagccgttcatgcagccgcggatgatcacgctggaggcg
ttgcgcgaactggccgagcagggcagcgacctggccctcgacgcctgcctgctgccgatc
gaggccgggctgaccggtttcggccgggtcagcctggattcgaccgcggccgagcgcctc
ggccatggccaggcggtcagctgcgaacccggcgagccgggtctggtggcggtgttcggc
gaagccgggcgctgcctgggcctgggcctgcgccaagccgaagggcgattgcagccacag
cgcctgttccgctgggcggcgcagggcggctga
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