Lysobacter antibioticus 76: LA76x_3048
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Entry
LA76x_3048 CDS
T04154
Name
(GenBank) outer membrane autotransporter barrel domain protein
KO
K20276
large repetitive protein
Organism
lab
Lysobacter antibioticus 76
Pathway
lab02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lab00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LA76x_3048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
He_PIG
Autotransporter
Big_9
Cadherin_5
SprB
Cadherin_4
NtrZ
Motif
Other DBs
NCBI-ProteinID:
ALN81176
UniProt:
A0A0S2FC84
LinkDB
All DBs
Position
complement(3529921..3536478)
Genome browser
AA seq
2185 aa
AA seq
DB search
MAVAAPSPHCGPFNISVVNGGTQIINASACDGPDNGGIGGIVTHPAHGTATSDQFGQTVT
YVHNGNTATSDTFVFGDGLGNDVTVNVTIGAPTSPIIVSPASISPVLGVPFSQALSATGG
VGPYSFVHTSGTLPTGLTFSGGAFGGTPTQRGNFAVNITVTDSTTPTPLTTVKSYAIVIP
IVTPVISPTTLPAMAVGIPYNTTLSSSGGVAPYIYSVQAAPNLLPPGLSLSSGGVISGTP
TTTGTYTFRILSEDSSGSQDGSDNIGNRLYTVTVTAAPTIVVDPATIPGATVGAAYSQTF
TASGGTSPYTFAISAGALPAGLTLASGGGLTGTPTAAGTFNFTVRATDANTFTGTRAYTL
TVAAPTTSIAPTTLLNGTVAAAYSQSITASGGIAPYTYAITAGALPAGLSLSSAGLLSGT
PTAGGSFNFTVTATGSSTGTGAPHTGSRAYTLVIAAPTINLPATTLANGTVAVAYGATLN
AASGGTAPYTYALSAGALPPGISLSSAGVLSGTPTAAGTFNFAVIATDSSTGTGAYSSAP
RGYSLQIINIPPVANAVSASVAYNSGANPITLNITGGVPTSVAVGTAPLHGTAIASGTSI
TYQPTAGYAGPDSFTYTASNGAGTSAPATVTITVSPPTITVTASSPLTAQIGVVYTQTFT
WSGGTQPFSGYNVTGLPAGLSIIGTTANSVTVSGTATAAGTFPLNASAIDSSTGDGPFTV
GQAFVLSVSAPTLSMTPAAGTLSATYGSVYSETFVASGGTLTYAYSVSAGALPAGLSLDG
GTGVLSGTPTVTGLFTFSVRAVDSSTGSGAPFSRTQNYVLQVAAPTIVIAPATVPGAQIG
ASYNEALSASGGIGPYSFAVTAGALPAGVSLSSTGTIAGTPTAGGTFNFTVTASDANAQT
GSRAFALTVAAATISVAPTTLPAGGVAQVYSQTLTASGGTPGYTFAITTGALPAGLSLAS
NGTLSGTPTAGGSFNFTATATDSSSGSGPYTGSRAYTLSIGASTVVLPPTSFAGPTVASP
YSANINAATGGTAPYSYAVVSGSLPPGMSFSSAGLISGTPTAPGTFNFSATATDSSTGTG
PYTSAPQSYSLTVADIAPVANPVSATVAYGSGANPITLNITGGIPALVAVAAAPAHGTAI
ASGTTITYQPAAGYAGSDSFTYTASNVAGTSAPATVTITVTNPVITVTAGGLLTTQVGAA
YSQTFTWAGGTSPYSGYNVAGLPAGLSITGTTADSVTVSGTPTAAGSFSLNASATDSSTG
NGPFTQGQAFTLTVGAPTLAMTPAPGNLPMNYGVATTVNFAASGGSAPYSFSIASGSLPV
GVSFSSAGVLSGTPTVPGNYNVGIRVQDSSTGTGAPFALQQSYTIVVAVPSIVLDPPTLP
NGTAGTTYNATITATGGVAPYSFSLLSGALPVGMTFSSAGALSGVPRSDGNFSLTVQGTD
SNGQTGSRVYTFTIAPATVVISPATLPGGVVGVAYNQSLSSSGGIAPYSYSIVSGNLPVG
LSFSSAGVYSGTPTTAGSYTANIRSTDDAGYNTTVPLTIVIVDAVPVAVDDSATTMSNQA
VTIPVTTNDTGIIASVAVASAPSHGTAVVSGLDVVYTPTSNYFGSDSFTYTVSGPGGTSA
PATVTITVNALPVPQGQPQTATILSTQIATIDAAAGATGSPFTGVTLLSPPSSGTAVVSG
TQIVYTPAANTVGPIALVYTLNNAFGPSAPITSTITVNAVPVAQSRRVRTIAGAAITVDL
TAGATGGPFTAANLVSLTPASSGSAAISGSGGVYTLRYTSVIGFSGVAVASFTLNNAHAT
SAVATIEIEVAPRSDPSKDAEVLGVLNAQASATRRFANSQIGNFQQRMQGMHEGGSDGAR
FDNGLSFSIDQRCRDEARRTPGSDCRQPLLGDEQAAIEPKPPVEGSGTRYGIWTGGSINT
GNRDGRGGGSAGLDFETSGISAGADYRLRDDFALGGGIGYGRDDTDVGQRGSRSKAKSYS
AVLYASYHPGESFYLDGLLGYQWLSFDTRRYVTDTGGMVRGDRDGTQWFASVSAGMDYRR
DRLHVSPYARLDVARARLDGYTEQGDASYSLTYRDMDVDTTTTSLGVRLDYRYPVRLGTF
SPMVLLEYQHDFQDESFATMSYADMVGGPFFRARLEGLDRNRFVFGIGAVLQTERDLVLR
FEYRGLFGSGNDDDNSFMINIEKKY
NT seq
6558 nt
NT seq
+upstream
nt +downstream
nt
atggccgttgccgcgccgtcgccgcattgcgggccgttcaatatctccgtggttaatggc
ggcacgcagatcatcaatgccagcgcctgcgacggcccggacaacggcggcatcggcggc
atcgtgacccacccggcacacggcaccgcgacgagcgatcagttcggccagacggtgacc
tacgtgcataacggcaacacggcgaccagcgacaccttcgtgttcggcgacggcctcggc
aacgatgtcaccgtcaacgtcaccatcggcgcgccgacctcgccgatcatcgtcagcccg
gcctcgatctcgccggtcctgggcgtgcccttcagccaggcgctgagcgccaccggcggc
gtcgggccctatagcttcgtgcataccagcggcaccttgccgactggcctgaccttctcc
ggcggcgccttcggcggcaccccgacccagcgcggcaacttcgcggtcaacatcaccgtg
accgattcgaccacgccgacgccgctgactacggtcaagtcgtatgcgatcgtcattccc
atcgtgacgccggtgatctcgccgacgaccctgccggcgatggcggtcggcattccctac
aacacgactttgagcagcagcggcggcgttgcgccgtacatctattcggtgcaagccgcg
ccgaacctgctgccgccgggcctgagcctgagcagcggcggcgtgatcagcggcaccccg
accaccaccggcacctacaccttccgcattctgtccgaggacagcagcggctcgcaggac
ggctccgacaatatcggcaaccggctctataccgttaccgtcacggcggcgccgaccatc
gtggtcgacccggccacgattccgggcgccaccgtcggcgccgcctatagccaaacgttc
accgccagcggcggcacctcgccgtacaccttcgcgatctcggcgggcgccttgccggcc
ggcctgacgctcgcgagcggcggcggcctgaccggcacgccgaccgcggcgggcaccttc
aacttcaccgtgcgcgccaccgatgccaacactttcaccggcactcgtgcctacaccctg
accgttgccgcgccgacgacctcgatcgcacctacgaccctgctgaacggcaccgtcgcg
gcggcctatagccagtccattaccgcgagcggtggtatcgcgccgtatacctatgcgatc
accgccggcgcgttgccggcgggcttgagcctgagcagcgcgggcctgttgagcggcact
ccgaccgcgggcggcagcttcaatttcaccgtcaccgcgaccggcagcagcaccggcacc
ggcgctccgcataccggttcgcgcgcctacaccctggtcatcgccgcgccgacgatcaac
ctgccggcgaccactctggccaacggcacggtcgccgtggcctatggcgccaccctcaac
gccgccagtggcggtaccgcgccgtacacttatgcgctgagtgccggcgcgctgccgccc
ggcatcagcctgagcagcgccggcgtgttgtcgggcacgcccaccgcggccggcaccttc
aacttcgccgtgatcgcgaccgacagcagtaccggcaccggcgcgtacagttcggcgccg
cgcggctattcgctgcagatcatcaacatcccgccggtcgccaatgcggtctcggccagc
gtcgcctacaacagcggcgccaacccgatcaccttgaacatcaccggcggcgtgccgacc
tcggtggccgtcggtacggcgccgctgcacggcaccgcgatcgccagcggcacctcgatt
acctaccagccgacggcgggttatgccggtccggacagcttcacctacaccgcgagcaac
ggcgccggcacttcggcaccggcgacggtcaccatcacggtgagcccgccgacgatcacc
gtgaccgcctccagcccgctgaccgcgcagatcggcgtggtgtatacgcagaccttcacc
tggtccggcggcacccagccgttcagcggttacaacgtgaccggcctgcctgccggtttg
agcatcatcggcaccaccgccaacagcgtgaccgtcagcggcacggcgaccgcggccggt
actttcccgctcaacgccagcgcaatcgacagcagcactggcgacggtccgttcaccgtc
ggccaggccttcgtcctgtcggtgagtgcgccgacgctgagcatgaccccggccgcaggc
accttgtccgcgacctatggcagcgtctatagcgagaccttcgtcgccagcggcggcacc
ctgacttacgcctacagcgtatcggcaggcgctttgccggccggcctgagcctggacggc
ggcaccggcgtgttgtcgggtaccccgaccgtgaccggtttgttcaccttctcggtccgc
gccgtcgacagttccaccggttccggtgcgccgttctcgcgcacccagaactacgtgctg
caggtcgctgccccgaccatcgtgatcgcaccggccaccgtgccgggcgcgcagatcggt
gcgagctacaacgaagcgttgagcgcgagtggcggcatcggcccgtatagcttcgcggtg
accgccggcgctttgccggccggcgtgagcctgagctcgaccggaaccatcgccggtacg
ccgactgcgggcggtaccttcaacttcaccgtcactgcgagcgacgccaacgcccagacc
ggttcgcgcgcctttgcgctgaccgtcgcggcggcgaccatcagcgttgcgccgacgacg
ctgccggcaggcggtgtggcccaggtctacagccagaccttgaccgcgtccggcggcacg
cccggttacaccttcgcgatcaccaccggcgccttgccggccggcctgagcctggccagc
aacggcacgctcagcggcaccccgaccgcgggcggcagcttcaacttcaccgccaccgcg
accgacagcagcagcggcagcggcccatacacaggttcgcgcgcctacaccctgagcatc
ggcgcctcgaccgtggtgttgccgccgacctcgttcgccggcccgaccgtcgcatcgccc
tacagcgccaacatcaatgcggccaccggcggcactgcgccctacagctatgccgtggtc
tccggctcgctgccgcccggcatgagcttcagcagcgccggcctgatcagcggcacgccg
acggcaccgggcacgttcaacttcagcgcgaccgcaaccgacagcagcaccggcaccggt
ccctacacctcggcgccgcagagttattcgttgacggtcgccgacatagcgccggtcgct
aatccggtctcggccacagtggcctacggcagcggcgccaacccgattacgctcaacatc
accggcggcatcccggctttggtcgcggtcgcggcggcacctgcgcacggcacggccatc
gccagcggcaccacgatcacctaccagccggccgcgggctacgccggcagcgacagcttc
acctacaccgcgagcaacgtcgccggcacttcggcgccggccacggtcaccatcaccgtc
accaacccggtgatcacggtgaccgcgggcggcctgctgaccacgcaggtcggcgccgct
tatagccagaccttcacctgggccggcggcacttcgccgtatagcggttataacgtcgcc
ggtttgccggcgggcctgagcatcaccggcacgaccgccgacagcgtcaccgtcagcggc
acgccgactgcggcgggcagcttcagcctcaacgccagcgcaaccgacagcagcaccggc
aacggcccgttcacccagggccaggccttcaccctgacggtcggcgcgccgaccctggcg
atgaccccggcgccgggcaacctgccgatgaactacggcgtcgccaccaccgtcaacttc
gccgcgagcggcggctcggcgccgtacagcttcagcatcgccagcggttcgctgccggtg
ggcgtgagcttcagttcggccggcgtgctcagcggcacgccgacggtgccgggcaattac
aacgtgggcatccgcgtgcaggacagcagcaccggcaccggtgcgccgttcgccctgcag
cagagctacaccatcgtggtcgccgtcccgagcatcgtcctggatcctccgacgctgccc
aacggcaccgccggcacgacctataacgcgaccatcaccgccaccggcggcgtcgcgccg
tacagcttctcgctgctcagcggcgcgttgccggtcggcatgacgttctcctcggccggc
gcgctcagcggcgtgccgcgctcggacggcaatttcagcctgaccgtgcagggcaccgac
agcaacggccagaccggctcgcgggtgtacaccttcaccatcgccccggcgaccgtggtg
atttcgccggcgaccttgccgggcggcgtggtcggcgtggcctacaaccagagcctgagc
agcagcggcggcatcgcgccgtacagctactcgatcgtctcgggcaacctgccggtcggc
ctgtccttcagttccgccggcgtgtacagcggcaccccgaccacggccggcagctacacc
gccaacatccgttccaccgacgacgccggttacaacaccacggtgccgctgacgatcgtg
atcgtcgacgcggtgccggtcgcggtcgacgacagcgccaccacgatgtcgaaccaggcg
gtgacgatcccggtcaccaccaacgacaccggcatcatcgccagtgtcgcggtcgcctcg
gcgccgagccacggcaccgcggtggtcagcggcctggatgtggtctacacgccgaccagc
aactacttcggcagcgacagcttcacctacaccgtcagcggcccaggcggcacctcggcg
ccggccacggtgacgatcaccgtcaacgcgttgccggtgccgcaaggccagccgcagact
gcgacgatcctgtcgacgcagatcgcgaccatcgatgcggccgccggcgccaccggcagc
ccgttcaccggcgtgaccctgttgagcccgccgtcgtcgggcacggcggtggtcagcggc
acccagatcgtttacaccccggcggccaacaccgtcggcccgatcgccctggtctacacg
ctcaacaacgccttcggcccgtccgcgccgattacctcgaccatcaccgtcaacgcggtg
ccggtcgcgcaatcgcgtcgcgtccgcaccatcgccggtgccgcgatcacggtcgatctg
accgccggcgccaccggcggtccgttcaccgcggcgaatctggtgtcgttgaccccggcg
tcgtccggcagcgcggcgatcagcggttccggcggtgtgtacaccttgcgctatacgtcg
gtgatcggtttctccggcgtcgcggtggcgagcttcactctcaacaacgcccatgcgacc
tcggcggtggcgaccatcgaaatcgaagtcgcgccgcgcagcgatccgtcgaaggacgcc
gaagtgctcggcgtgctcaacgctcaggcttcggccacgcgtcgtttcgccaactcgcag
atcggcaacttccagcagcgcatgcagggcatgcacgagggcggcagcgacggcgcacgc
ttcgacaacggcctgagcttctcgatcgatcaacgctgccgcgacgaagcgcggcgcacg
ccgggcagcgattgccgccagcccctgctcggcgacgagcaggccgcgatcgagcccaag
ccgccggtcgaaggcagcggcacccgctacggcatctggaccggcggttcgatcaacacc
ggcaaccgcgacggacgcggcggcggttcggccggcctcgacttcgagaccagcggcatc
agcgccggcgccgactaccgcctgcgcgacgatttcgcgctcggcggcggcatcggctac
ggtcgcgacgacaccgacgtcggtcagcgcggcagccgcagcaaggccaagagttacagt
gcggtgttgtacgccagctaccacccgggcgagagcttctatctcgacggcctgctcggc
taccagtggctgtcgttcgatacccgccgctacgtcaccgacactggcggcatggtccgc
ggcgaccgcgacggcacccagtggttcgcctcggtctcggccggcatggactaccggcgc
gatcgcctgcacgtctcgccgtacgcccgcctcgacgtcgctcgcgcgcgcctggacggc
tataccgaacagggcgatgcgtcgtactcgttgacctatcgggacatggacgtcgatacc
accacgaccagcctgggcgtgcgtctggactatcgttatccggtgcgcctgggtacgttc
tcgccgatggtcctgctggagtaccagcacgacttccaggacgagagcttcgcgacgatg
agctatgccgacatggtcggtggtccgttcttccgcgcccgcctcgaaggcctggaccgc
aaccgcttcgtgttcggcatcggcgcggtcctgcagaccgagcgcgacctggtcctgcgc
ttcgaataccgcggcctgttcggcagcggcaacgacgacgacaacagcttcatgatcaac
atcgagaagaagtactga
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