KEGG   Lysobacter antibioticus 76: LA76x_3307
Entry
LA76x_3307        CDS       T04154                                 
Symbol
rnd
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
lab  Lysobacter antibioticus 76
Brite
KEGG Orthology (KO) [BR:lab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lab03016]
    LA76x_3307 (rnd)
Enzymes [BR:lab01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     LA76x_3307 (rnd)
Transfer RNA biogenesis [BR:lab03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    LA76x_3307 (rnd)
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC RNAseD_HRDC_C
Other DBs
NCBI-ProteinID: ALN81434
UniProt: A0A0S2FD17
LinkDB
Position
3813690..3814793
AA seq 367 aa
MPVWITTPAALQAHFEVKPERIGLDTEFIRERTYWPQLALVQIAIESADADEPTILLVDP
LRPGIAEALAPILADESILKIVHSPSEDLVAFKHACGVVPKPLFDTQQAAALAGIGSGLG
YQKLVEQLTGVALAKGETRSDWMRRPLSPSQLEYAADDVRHLFAMQDALDGLLAPLGRRA
WLDEDAARTVYNAENEAPERWPHLSMRSAQFLDVPAQRRLVRLLRWRDAYARDSDRPRSW
ILDNELAVSIARQMPADRDALQRQLDAHPKAPRKLGDAIWTALSTELADEDQTPDAGVAE
TRDKQRLRQLQEAVATRSAALGLPDGVLASRRWLEALLDHGDWPDALSGWRRAALEPDLA
PLLAQQS
NT seq 1104 nt   +upstreamnt  +downstreamnt
atgcccgtctggatcaccacccccgccgcgctgcaagcgcatttcgaggtcaagcccgaa
cgcatcgggctggacaccgaattcatccgcgaacgcacctactggccgcagctggcgctg
gtgcagatcgcgatcgaaagcgccgacgccgacgaaccgacgatcctgttggtcgacccc
ttgcgccccggcatcgccgaagcgctggcgccgatcctcgctgacgagagcatcctcaag
atcgtgcacagcccgagcgaggacctggtcgccttcaagcacgcctgcggcgtggtgccc
aagccgctgttcgacacccagcaggccgcggccctggccggcatcggcagcggcctgggc
tatcagaagctggtcgaacaactgaccggcgtggccctcgccaagggcgagacccgctcg
gactggatgcgccgcccgctctcgccctcgcagctcgaatacgccgccgacgacgtgcgc
cacctgttcgccatgcaagacgccctcgacggcctgctcgccccgctcggccgccgcgcc
tggctcgacgaagacgccgctcgcactgtctacaacgccgaaaacgaagccccggaacgc
tggccgcatctgtcgatgcgcagcgcccaattcctcgacgtccccgcgcagcgccgcctg
gtgcgcctgctgcgctggcgcgacgcctatgcgcgcgacagcgaccgcccgcgcagctgg
atcctcgacaacgaactcgccgtctcgatcgcgcggcagatgccggccgaccgcgacgcc
ctgcagcgccagctcgacgcccaccccaaggccccgcgcaagctcggcgacgccatctgg
accgcactgagcaccgagctggccgacgaagaccagacccccgacgccggcgtcgccgaa
acccgcgacaaacagcgcctgcgccaactccaggaagccgtggccacccgcagcgccgcc
ctcggcctgcccgacggcgtgctcgcctcgcgccgctggctcgaagccctgctcgaccac
ggcgactggcccgacgccctgtccggctggcgccgcgccgcactcgaacccgacctcgcc
cccttgctggcccaacagagctga

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