| Entry |
|
|---|
| Name |
(GenBank) hhH-GPD superbase excision DNA repair family protein
|
|---|
| KO |
|
|---|
| Organism |
lab Lysobacter antibioticus 76
|
|---|
| Pathway |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:lab00001]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LA76x_3609
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:lab03400]
LA76x_3609
Enzymes [BR:lab01000]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
LA76x_3609
DNA repair and recombination proteins [BR:lab03400]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LA76x_3609
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
complement(4179581..4180270)
|
|---|
| AA seq |
229 aa
MPRHVRGFDAEAAHAYLSKRDRKLGAWMKKVDRLENGPIPTDPRWRQRFDPVDALARAIL
FQQLSGKAASTIVGRVEAAIGSGRLHYDTLGRCDDAALRACGVSGNKLLALRDLSARESR
GEIPDLRRMATMDNDAIIAALVPIRGIGRWTVEMMLMFRLGRPDILPVDDLGIRKGAQRV
DKLDEMPPPKALAELGERWGPYRSYASLYLWRIADFSEVAKPRTNRSQD |
|---|
| NT seq |
690 nt +upstreamnt +downstreamnt
atgccgcgacatgtccgggggttcgacgccgaggccgcgcacgcttatctaagcaagcgc
gaccgcaagctcggcgcatggatgaagaaggtcgaccgtctcgaaaacggcccgattccg
accgatccgcgctggcgccagcgcttcgatccggtcgatgcgctggcgcgggcgatcctg
ttccagcagctcagcggcaaggccgcctcgaccatcgtcggccgggtcgaggcggcgatc
ggcagcggccgcctgcattacgacaccctcggccgttgcgacgacgcggcgttgcgcgcc
tgcggcgtatccggcaataagctgctcgcgctgcgcgatctgtcggcgcgtgaatcgcgc
ggcgaaatcccggacctgcggcgcatggcgacgatggacaacgacgccatcatcgccgcg
ctcgtgccgatccgcggcatcggccgctggacggtcgagatgatgctgatgttccgcctg
ggccgccccgacatcctgccggtcgacgatctgggcatccgcaagggcgcacagcgcgtc
gacaagctcgacgagatgccgccgccgaaggccttggccgaactcggcgaacgctggggg
ccgtaccgcagctatgccagcctgtatctgtggcggatcgcggatttttccgaggtcgcc
aagcccaggaccaaccgctcgcaggattga |
|---|
