Lysobacter antibioticus 76: LA76x_3699
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Entry
LA76x_3699 CDS
T04154
Name
(GenBank) tRNA pseudouridine synthase, TruD family protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
lab
Lysobacter antibioticus 76
Brite
KEGG Orthology (KO) [BR:
lab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lab03016
]
LA76x_3699
Enzymes [BR:
lab01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
LA76x_3699
Transfer RNA biogenesis [BR:
lab03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LA76x_3699
Prokaryotic type
LA76x_3699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ALN81821
UniProt:
A0A0S2FEC0
LinkDB
All DBs
Position
complement(4270819..4271910)
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AA seq
363 aa
AA seq
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MSEDSQDGMAPVGAAQDAALARAHGAAVLSARIRTSSEDFRVEELPGFAASGSGEHLLLT
VEKRGMNTAFAAKRIAAWAGIGEVGIGYAGLKDRHAVTVQRFSVHLPKRIAPDLGGLQDD
ELRVLDSQWHAKKLPRGALAGNRFVLTLREIEGEREAIDARLAHIAARGVPNYFGEQRFG
RDGDNVVNALAMFAGRRVRREQRSLLLSAARSELFNRVLAVRVADGSWDGLRDGASLAGE
VWALAGSRSVFGPEAWSETLAQRLAAFDIHPSGPLWGRGELRSTDEVRALELAALEGEQA
LALRAGLEAAGLDQERRALRLRPDGLAWRWLDDGALEVSFALPAGAYATVVLAELGEIRS
GAA
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggattcgcaggacggcatggcgccggtcggtgccgcgcaggacgccgcgctc
gctcgcgcccacggtgcggccgtgctcagtgcgcgcatccgcacctcgtcggaggatttc
cgggtcgaggaactgcccggtttcgccgccagcggcagtggcgagcacttgctgctgacg
gtggaaaagcgcggcatgaacactgccttcgcggccaagcgcatcgccgcctgggccggc
atcggcgaggtcgggatcggctatgccgggctcaaggaccggcatgccgtcaccgtgcag
cgcttcagcgtgcacctgcccaagcgcatcgcgccggacctgggcggcctgcaggacgac
gagctgcgcgtgctcgacagccaatggcatgcgaagaaactgccgcgcggcgccttggcc
ggcaaccgcttcgtgctgaccctgcgcgagatcgaaggcgagcgcgaggcgatcgacgcg
cgcttggcccacatcgccgcacgcggcgtgccgaactatttcggcgaacagcgtttcggc
cgcgacggcgacaacgtcgtcaacgccctggcgatgttcgcagggcgccgggtgcgccgc
gagcaacgcagcctgttgctgtcggcggcgcgctcggagctgttcaatcgcgtactcgcg
gtgcgcgtggccgacggcagttgggacggtttgcgcgacggcgcgtcgctcgccggcgag
gtctgggccctggccggcagccgcagcgtgttcggccccgaagcctggagcgaaacgctc
gcgcaacgcctggccgctttcgacatccatcccagcggtcccttgtgggggcgcggcgaa
ctgcgcagcaccgacgaggtgcgggcgttggagctggccgcgctcgaaggcgagcaggcg
ctggccctgcgcgcgggcctggaagcggccgggctcgatcaggagcgccgtgcgctgcgt
ctgcgcccggatggcctggcctggcgctggctcgacgacggtgccttggaagtgtctttc
gccttgccggccggcgcctacgcgaccgtggtcctggccgagctcggcgagatccgttcc
ggcgcggcctga
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