Lysobacter antibioticus 76: LA76x_4173
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Entry
LA76x_4173 CDS
T04154
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase, omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
lab
Lysobacter antibioticus 76
Pathway
lab03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lab00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LA76x_4173 (rpoZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lab03021
]
LA76x_4173 (rpoZ)
03400 DNA repair and recombination proteins [BR:
lab03400
]
LA76x_4173 (rpoZ)
Enzymes [BR:
lab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LA76x_4173 (rpoZ)
Transcription machinery [BR:
lab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LA76x_4173 (rpoZ)
DNA repair and recombination proteins [BR:
lab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LA76x_4173 (rpoZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
ALN82289
UniProt:
A0A0S2FFK6
LinkDB
All DBs
Position
complement(4771109..4771408)
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AA seq
99 aa
AA seq
DB search
MARITVEDCLEVVDNRFELVMLAAKRARQLANGVEPQLDNSEANDKPTVLALREIAARQI
NPEYIDAVEKAERERKEREALEWAAAEVVADDDLSKSDD
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcattaccgtcgaagattgcctggaagtggtcgataaccgcttcgaactcgtc
atgttggccgccaagcgtgcgcgtcagctggccaacggcgtcgagccgcagctggacaac
agcgaagccaacgacaagccgaccgtgctggcactgcgcgaaatcgccgcgcgccagatc
aaccccgaatacatcgatgcggtcgagaaggccgagcgcgagcgcaaagagcgcgaagcc
ctggaatgggccgccgccgaagtggtcgccgacgacgatctgtcgaagagcgacgactga
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