KEGG   Lysobacter antibioticus 76: LA76x_4289
Entry
LA76x_4289        CDS       T04154                                 
Symbol
groL
Name
(GenBank) chaperonin GroL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
lab  Lysobacter antibioticus 76
Pathway
lab03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lab00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LA76x_4289 (groL)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lab03019]
    LA76x_4289 (groL)
   03110 Chaperones and folding catalysts [BR:lab03110]
    LA76x_4289 (groL)
   03029 Mitochondrial biogenesis [BR:lab03029]
    LA76x_4289 (groL)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lab04147]
    LA76x_4289 (groL)
Enzymes [BR:lab01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     LA76x_4289 (groL)
Messenger RNA biogenesis [BR:lab03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     LA76x_4289 (groL)
Chaperones and folding catalysts [BR:lab03110]
 Heat shock proteins
  HSP60 / Chaperonin
   LA76x_4289 (groL)
Mitochondrial biogenesis [BR:lab03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    LA76x_4289 (groL)
Exosome [BR:lab04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   LA76x_4289 (groL)
  Exosomal proteins of other body fluids (saliva and urine)
   LA76x_4289 (groL)
  Exosomal proteins of breast cancer cells
   LA76x_4289 (groL)
  Exosomal proteins of colorectal cancer cells
   LA76x_4289 (groL)
  Exosomal proteins of bladder cancer cells
   LA76x_4289 (groL)
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: ALN82400
UniProt: A0A0S2FFV6
LinkDB
Position
complement(4901346..4902986)
AA seq 546 aa
MSAKEIRFGEDARAKMVRGVNILANAVKATLGPKGRNVVLEKSFGAPTITKDGVSVAKEI
ELADKFENMGAQMVKEVASKTSDNAGDGTTTATVLAQALIREGMKAVAAGMNPMDLKRGI
DKAVIEAVAELKKLSKPSSTSKEIAQVGAISANSDADIGDLIAQAMDKVGKEGVITVEDG
SGLENELDVVEGMQFDRGYLSPYFINNQQSMSAELDDPFVLLYDKKISNVRDLLPVLEGV
AKAGKPLLIVAEEVEGEALATLVVNTIRGIVKVCAVKAPGFGDRRKAMLEDMAVLTGGTV
ISEEVGLQLEKATIKDLGRAKKVQVSKENTTIIDGAGDGDSIQARIKQIKAQIEETSSDY
DREKLQERVAKLAGGVAVIKVGASTEIEMKEKKARVEDALHATRAAVEEGIVPGGGVALL
RAKAAISGLKGANEDQNHGIQIALRAMEAPLREIVTNAGEEPSVILNKVQEGKGAFGYNA
ANGEYGDMLEFGILDPTKVTRTALQNAASIAGLMITTEAMVAELPKKDEPAMPGGGGMGG
MGGMDF
NT seq 1641 nt   +upstreamnt  +downstreamnt
atgtccgctaaagaaattcgtttcggtgaggacgcgcgcgccaagatggtgcgcggcgtc
aacattctcgccaatgccgtgaaggccaccctcggtccgaagggccgtaacgtcgtgctc
gagaagagcttcggcgcgccgacgatcaccaaggacggcgtgtccgtcgccaaggaaatc
gaactggccgacaagttcgagaacatgggcgcgcagatggtcaaggaagtcgcttccaag
acctccgacaacgccggcgacggcaccaccaccgcgaccgtgctggcccaggcgctgatc
cgcgaaggcatgaaggccgttgccgccggcatgaacccgatggacctcaagcgcggcatc
gacaaggccgtgatcgaggccgtggccgagctcaagaagctctccaagccgtcctcgacc
agcaaggaaatcgcccaggtcggcgcgatctccgccaactccgacgccgacatcggcgac
ctcatcgcccaggcgatggacaaggtcggcaaggaaggcgtgatcaccgtcgaagacggt
tcgggccttgagaacgaactcgacgtcgtcgagggcatgcagttcgaccgcggctacctg
tcgccgtacttcatcaacaaccagcagtcgatgtcggccgagctcgacgacccgttcgtg
ctgctgtacgacaagaagatctccaacgtccgcgacctgctgccggtgctggaaggcgtc
gccaaggccggtaagccgctgctgatcgtcgccgaggaagtcgaaggcgaagcgctggcg
accctggtggtcaacaccatccgcggcatcgtcaaggtctgcgccgtcaaggcgccgggc
ttcggcgaccgtcgcaaggcgatgctggaagacatggccgtgctgaccggcggcaccgtg
atctccgaggaagtcggcctgcagctcgaaaaggccacgatcaaggatctcggccgcgcg
aagaaggtgcaggtctccaaggagaacaccaccatcatcgacggcgccggcgacggcgat
tcgatccaggcccgcatcaagcagatcaaggcgcagatcgaagagacctcttcggactac
gaccgcgagaagctgcaggagcgcgtggccaagctggccggcggcgtggcggtgatcaag
gtcggcgcatcgaccgagatcgagatgaaggaaaagaaggctcgcgtcgaagacgcgctg
cacgctacccgcgctgccgtggaagaaggcatcgtcccgggcggcggcgtcgcgctgctg
cgcgccaaggctgcgatctcgggcctgaagggcgccaacgaagaccagaaccacggcatc
cagatcgccctgcgcgcgatggaagccccgctgcgcgaaatcgtcaccaacgccggcgaa
gagccgtcggtcatcctgaacaaggtccaggaaggcaagggcgcgttcggttacaacgcc
gccaacggcgaatacggcgacatgctcgagttcggcatcctggacccgaccaaggtcacc
cgcaccgcgctgcagaacgccgcgtcgatcgccggtctgatgatcacgaccgaagcgatg
gtcgccgagctgccgaagaaggacgagccggcgatgccgggcggcggcggcatgggcggc
atgggcggcatggatttctga

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