Lysobacter antibioticus 76: LA76x_4394
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Entry
LA76x_4394 CDS
T04154
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
lab
Lysobacter antibioticus 76
Pathway
lab00010
Glycolysis / Gluconeogenesis
lab00020
Citrate cycle (TCA cycle)
lab00260
Glycine, serine and threonine metabolism
lab00280
Valine, leucine and isoleucine degradation
lab00310
Lysine degradation
lab00380
Tryptophan metabolism
lab00620
Pyruvate metabolism
lab00630
Glyoxylate and dicarboxylate metabolism
lab00640
Propanoate metabolism
lab00670
One carbon pool by folate
lab00785
Lipoic acid metabolism
lab01100
Metabolic pathways
lab01110
Biosynthesis of secondary metabolites
lab01120
Microbial metabolism in diverse environments
lab01200
Carbon metabolism
lab01210
2-Oxocarboxylic acid metabolism
lab01240
Biosynthesis of cofactors
Module
lab_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lab_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
lab_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
lab_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
lab_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
lab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
LA76x_4394 (lpdA)
00020 Citrate cycle (TCA cycle)
LA76x_4394 (lpdA)
00620 Pyruvate metabolism
LA76x_4394 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
LA76x_4394 (lpdA)
00640 Propanoate metabolism
LA76x_4394 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LA76x_4394 (lpdA)
00280 Valine, leucine and isoleucine degradation
LA76x_4394 (lpdA)
00310 Lysine degradation
LA76x_4394 (lpdA)
00380 Tryptophan metabolism
LA76x_4394 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
LA76x_4394 (lpdA)
00670 One carbon pool by folate
LA76x_4394 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lab04147
]
LA76x_4394 (lpdA)
Enzymes [BR:
lab01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
LA76x_4394 (lpdA)
Exosome [BR:
lab04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
LA76x_4394 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Biotin_lipoyl
Pyr_redox_3
FAD_oxidored
Biotin_lipoyl_2
NAD_binding_8
HI0933_like
GIDA
FAD_binding_2
AlaDh_PNT_C
Thi4
GCV_H
RnfC_N
3HCDH_N
DUF478
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
ALN82504
UniProt:
A0A0S2FG39
LinkDB
All DBs
Position
complement(5013871..5015688)
Genome browser
AA seq
605 aa
AA seq
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MANNIEVKVPDIGGYDDVPVIELLVAVGDTVKKDQGLVTLESDKATMEVPSSADGVVKSI
SVKIGDKVSEGAVIAILEAEGAGEAPKPAAEKSAPAPAEASKPAAAAAAPSAAASSAPAP
SAAAASGRKADVECRMLVLGSGPGGYTAAFRAADLGLDTVLVERYASLGGVCLNVGCIPS
KALLHAAAVIDEAEHASDYGVSFGKPSIDLDALRKYKEKVVGQLTKGLAGMAKQRKVRVV
SGTGSFVSPNELEVAGEGGTQLIRFEQCIIAAGSQAVKLGNFPWDDKRVMDSTDALELAE
IPRKLLVVGGGIIGLEMATVYRALGSEVTVVEFMDQLMPGADPDLVKPLADRLKKQGVAV
HLKTKAAATEALKEGIKVSFESAEAGKAAALEATVYDRVLVAVGRAPNGGKIGADKAGVS
VTERGFIPVDRQMRTNVPHIFAIGDLVGNPMLAHKATHEGKLAAEVAAGEKKEWVARVIP
SVAYTDPEIAWVGVTESEAKAKGLKVGIGKFPWAASGRAIGIGRTEGFTKLIFDEATHRI
VGGGIVGVHAGDLIAEIGLAIEMGCEVADIGHTIHPHPTLSESVGMAAEVFDGTITDLYI
PKKKG
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaacatcgaagtgaaggttcccgacatcggcggctacgacgacgtgccggtg
atcgaattgctggtcgccgtcggcgatacggtgaagaaagaccagggcctggtcacgctg
gaatcggacaaggcgacgatggaagtgccttcgtcggccgacggcgtggtcaagtcgatc
agcgtcaagatcggcgacaaggtttcggagggcgcggtgatcgcgatcctcgaagcggaa
ggcgcaggcgaggcgccgaagccggctgcggaaaagagcgcgccggcgccggccgaagcg
tcgaagcccgccgccgctgcggcggctccgtcggcagcggccagcagcgcacccgcaccg
agcgccgccgcggcaagcggccgcaaggccgatgtcgaatgccgcatgctcgtgctcggc
tccggccccggcggctacaccgccgcgttccgcgccgccgacctcggcctcgacaccgtg
ctggtcgagcgttatgcgagcctcggcggcgtttgtctcaatgtcggctgtattccgtcc
aaggcgttgctgcatgcggccgcggtcatcgacgaggccgagcacgccagcgactacggc
gtcagcttcggcaagccgagcatcgacctggatgcgttgcgcaaatacaaggaaaaagtg
gtcggccagctgaccaagggcctggccggcatggccaagcagcgcaaagtgcgcgtggtc
tccggtaccggcagcttcgtctcgcccaacgaactggaagtggcgggcgagggcggcacc
caattgatccgcttcgagcagtgcatcatcgccgccggttcgcaggcggtgaagctcggc
aatttcccgtgggacgacaagcgcgtgatggactccaccgacgcgctggaactggccgag
attccgcggaaactgctggtcgtcggcggcggcatcatcggcctggaaatggccacggtg
taccgcgccttgggcagcgaagtcaccgtggtcgagttcatggaccagttgatgccgggc
gccgatcccgatctggtcaagccgctcgccgaccgcctgaagaagcagggcgtggcggtg
catctgaagaccaaggccgcggccaccgaggcgttgaaggaaggcatcaaggtctccttc
gaaagcgccgaggccggcaaggccgccgcgctcgaggcgaccgtctacgaccgcgtgttg
gtcgcggtgggccgcgcgccgaacggcggcaagatcggcgccgacaaagccggcgtcagc
gtcaccgagcgcggtttcatcccggtcgaccggcagatgcgcaccaacgtgccgcacatc
ttcgccatcggcgatctggtcggtaacccgatgctcgcccacaaggccacccacgaaggc
aagctcgccgccgaagtggccgccggcgagaagaaagagtgggtggcgcgggtgattccg
tcggtggcctataccgatccggaaatcgcctgggtcggcgtcaccgagagcgaagccaag
gccaagggtctcaaggtcggcatcggcaagttcccgtgggccgcgagcggccgcgcgatc
ggcatcggccgcaccgagggcttcaccaagctgatcttcgacgaagccacccaccgcatc
gtcggcggcggcatcgtcggtgtgcacgccggcgacctgatcgccgagatcggcctggcg
atcgagatgggctgtgaagtcgccgacatcggccacaccatccacccgcacccgaccctg
agcgaatcggtcggcatggccgccgaggtgttcgacggcaccatcaccgatctgtatatc
ccgaagaagaagggctga
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