KEGG   Lysobacter antibioticus 76: LA76x_4394
Entry
LA76x_4394        CDS       T04154                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
lab  Lysobacter antibioticus 76
Pathway
lab00010  Glycolysis / Gluconeogenesis
lab00020  Citrate cycle (TCA cycle)
lab00260  Glycine, serine and threonine metabolism
lab00280  Valine, leucine and isoleucine degradation
lab00310  Lysine degradation
lab00380  Tryptophan metabolism
lab00620  Pyruvate metabolism
lab00630  Glyoxylate and dicarboxylate metabolism
lab00640  Propanoate metabolism
lab00670  One carbon pool by folate
lab00785  Lipoic acid metabolism
lab01100  Metabolic pathways
lab01110  Biosynthesis of secondary metabolites
lab01120  Microbial metabolism in diverse environments
lab01200  Carbon metabolism
lab01210  2-Oxocarboxylic acid metabolism
lab01240  Biosynthesis of cofactors
Module
lab_M00009  Citrate cycle (TCA cycle, Krebs cycle)
lab_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
lab_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
lab_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
lab_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:lab00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    LA76x_4394 (lpdA)
   00020 Citrate cycle (TCA cycle)
    LA76x_4394 (lpdA)
   00620 Pyruvate metabolism
    LA76x_4394 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    LA76x_4394 (lpdA)
   00640 Propanoate metabolism
    LA76x_4394 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    LA76x_4394 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    LA76x_4394 (lpdA)
   00310 Lysine degradation
    LA76x_4394 (lpdA)
   00380 Tryptophan metabolism
    LA76x_4394 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    LA76x_4394 (lpdA)
   00670 One carbon pool by folate
    LA76x_4394 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lab04147]
    LA76x_4394 (lpdA)
Enzymes [BR:lab01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     LA76x_4394 (lpdA)
Exosome [BR:lab04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   LA76x_4394 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Biotin_lipoyl Pyr_redox_3 FAD_oxidored Biotin_lipoyl_2 NAD_binding_8 HI0933_like GIDA FAD_binding_2 AlaDh_PNT_C Thi4 GCV_H RnfC_N 3HCDH_N DUF478 FAD_binding_3
Other DBs
NCBI-ProteinID: ALN82504
UniProt: A0A0S2FG39
LinkDB
Position
complement(5013871..5015688)
AA seq 605 aa
MANNIEVKVPDIGGYDDVPVIELLVAVGDTVKKDQGLVTLESDKATMEVPSSADGVVKSI
SVKIGDKVSEGAVIAILEAEGAGEAPKPAAEKSAPAPAEASKPAAAAAAPSAAASSAPAP
SAAAASGRKADVECRMLVLGSGPGGYTAAFRAADLGLDTVLVERYASLGGVCLNVGCIPS
KALLHAAAVIDEAEHASDYGVSFGKPSIDLDALRKYKEKVVGQLTKGLAGMAKQRKVRVV
SGTGSFVSPNELEVAGEGGTQLIRFEQCIIAAGSQAVKLGNFPWDDKRVMDSTDALELAE
IPRKLLVVGGGIIGLEMATVYRALGSEVTVVEFMDQLMPGADPDLVKPLADRLKKQGVAV
HLKTKAAATEALKEGIKVSFESAEAGKAAALEATVYDRVLVAVGRAPNGGKIGADKAGVS
VTERGFIPVDRQMRTNVPHIFAIGDLVGNPMLAHKATHEGKLAAEVAAGEKKEWVARVIP
SVAYTDPEIAWVGVTESEAKAKGLKVGIGKFPWAASGRAIGIGRTEGFTKLIFDEATHRI
VGGGIVGVHAGDLIAEIGLAIEMGCEVADIGHTIHPHPTLSESVGMAAEVFDGTITDLYI
PKKKG
NT seq 1818 nt   +upstreamnt  +downstreamnt
atggccaacaacatcgaagtgaaggttcccgacatcggcggctacgacgacgtgccggtg
atcgaattgctggtcgccgtcggcgatacggtgaagaaagaccagggcctggtcacgctg
gaatcggacaaggcgacgatggaagtgccttcgtcggccgacggcgtggtcaagtcgatc
agcgtcaagatcggcgacaaggtttcggagggcgcggtgatcgcgatcctcgaagcggaa
ggcgcaggcgaggcgccgaagccggctgcggaaaagagcgcgccggcgccggccgaagcg
tcgaagcccgccgccgctgcggcggctccgtcggcagcggccagcagcgcacccgcaccg
agcgccgccgcggcaagcggccgcaaggccgatgtcgaatgccgcatgctcgtgctcggc
tccggccccggcggctacaccgccgcgttccgcgccgccgacctcggcctcgacaccgtg
ctggtcgagcgttatgcgagcctcggcggcgtttgtctcaatgtcggctgtattccgtcc
aaggcgttgctgcatgcggccgcggtcatcgacgaggccgagcacgccagcgactacggc
gtcagcttcggcaagccgagcatcgacctggatgcgttgcgcaaatacaaggaaaaagtg
gtcggccagctgaccaagggcctggccggcatggccaagcagcgcaaagtgcgcgtggtc
tccggtaccggcagcttcgtctcgcccaacgaactggaagtggcgggcgagggcggcacc
caattgatccgcttcgagcagtgcatcatcgccgccggttcgcaggcggtgaagctcggc
aatttcccgtgggacgacaagcgcgtgatggactccaccgacgcgctggaactggccgag
attccgcggaaactgctggtcgtcggcggcggcatcatcggcctggaaatggccacggtg
taccgcgccttgggcagcgaagtcaccgtggtcgagttcatggaccagttgatgccgggc
gccgatcccgatctggtcaagccgctcgccgaccgcctgaagaagcagggcgtggcggtg
catctgaagaccaaggccgcggccaccgaggcgttgaaggaaggcatcaaggtctccttc
gaaagcgccgaggccggcaaggccgccgcgctcgaggcgaccgtctacgaccgcgtgttg
gtcgcggtgggccgcgcgccgaacggcggcaagatcggcgccgacaaagccggcgtcagc
gtcaccgagcgcggtttcatcccggtcgaccggcagatgcgcaccaacgtgccgcacatc
ttcgccatcggcgatctggtcggtaacccgatgctcgcccacaaggccacccacgaaggc
aagctcgccgccgaagtggccgccggcgagaagaaagagtgggtggcgcgggtgattccg
tcggtggcctataccgatccggaaatcgcctgggtcggcgtcaccgagagcgaagccaag
gccaagggtctcaaggtcggcatcggcaagttcccgtgggccgcgagcggccgcgcgatc
ggcatcggccgcaccgagggcttcaccaagctgatcttcgacgaagccacccaccgcatc
gtcggcggcggcatcgtcggtgtgcacgccggcgacctgatcgccgagatcggcctggcg
atcgagatgggctgtgaagtcgccgacatcggccacaccatccacccgcacccgaccctg
agcgaatcggtcggcatggccgccgaggtgttcgacggcaccatcaccgatctgtatatc
ccgaagaagaagggctga

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