Lysobacter antibioticus 76: LA76x_4627
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Entry
LA76x_4627 CDS
T04154
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
lab
Lysobacter antibioticus 76
Pathway
lab03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LA76x_4627 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lab03400
]
LA76x_4627 (xth)
Enzymes [BR:
lab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
LA76x_4627 (xth)
DNA repair and recombination proteins [BR:
lab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LA76x_4627 (xth)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ALN82730
UniProt:
A0A0S2E3D0
LinkDB
All DBs
Position
complement(5268510..5269283)
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AA seq
257 aa
AA seq
DB search
MRIISFNANGLRSATTKGFFDWFKTQNADVLCVQETKAQEHQLAGPAFLPDGYRAYFRDA
TTKKGYSGVAIYSRREPDEVRTALGWAPFDEEGRYIEARFGNLSVVSFYIPSGSSGELRQ
GFKFEVMEWLKPILDQWLASGRDYVLCGDWNIVRTRLDIKNWSSNQKNSGCLPPERDWLN
GVCMDESGWVDAYRSLNAEGQDYTWWSNRGAARANDVGWRIDYQFATPSLRDRLRGCSIL
REPRFSDHAPFSVDYDL
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcatcagcttcaacgccaacggtctgcgctcggccacgaccaagggcttcttc
gactggttcaagacccagaacgcggacgtgctctgcgtccaggagaccaaggcccaggag
caccagttggccgggccggccttcctgcccgacggctaccgcgcctatttccgcgacgcc
accaccaagaagggctacagcggcgtggcgatctacagccggcgcgagcccgacgaggtc
cgcaccgccctgggctgggcgccgttcgacgaagaaggccgctacatcgaggcgcgcttc
ggcaacctcagcgtagtctcgttctacatcccgtccgggtcgtccggcgagctgcgccag
ggtttcaagttcgaggtcatggaatggctgaagccgatcctcgaccaatggctggcgagc
ggccgcgactacgtcctgtgcggcgactggaacatcgtccgcacccgtttggacatcaag
aactggagctcgaaccagaagaactccggctgcctgccgccggagcgcgactggctcaac
ggcgtgtgcatggacgaaagcggctgggtcgacgcctatcgcagcttgaacgccgagggc
caggactacacctggtggagcaaccgcggcgccgcgcgcgccaacgacgtcggttggcgc
atcgattaccagttcgccaccccgagtctgcgcgaccgcctgcgcggctgctcgatcctg
agagaaccgcgcttctccgaccacgcgcctttcagcgtcgactatgacctctga
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