Lysobacter antibioticus 76: LA76x_4797
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Entry
LA76x_4797 CDS
T04154
Name
(GenBank) type III secretion apparatus protein, YscD/HrpQ family
Organism
lab
Lysobacter antibioticus 76
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Gene cluster
GFIT
Motif
Pfam:
Yop-YscD_cpl
FHA
Yop-YscD_ppl
Motif
Other DBs
NCBI-ProteinID:
ALN82900
UniProt:
A0A0S2FH71
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Position
complement(5461376..5462818)
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AA seq
480 aa
AA seq
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MSSTDIHTEPAEPRVAAASPAVSVLRIVSGLHAGASRPLSAQETLLIGSGGDCDIVLSDA
GVAPHHAFITRMGGTVSLRAVDAPLQIDGQILNPGDPAELSAMQRVDLGSASLAVGASED
PAWATILPNLGEMAKPPRSSMRHLPLIAGLAALSLVSVAIAAAVMPGFEKEPTAMEVVTP
LIKEFSIVGGRAVENEDGSLVLSGTIKDATTREMIRKRLVTNNVQARLDLRTGDDIAADV
REVLRSQGLAVQTRYLGNGDVEVAGRFADQDKFKRAIASRAMQDVNGVRRVIPRDLDESA
QPAAGPTVAAADTEPKKPVSTAPTRVVQIVRGTNPHVIDVDGARYAVGDAMPDGRSLIAI
GDKAWALNKVSGQVEEIKAQPVTAAEQAAIAAAAAGVTPAPAATAPTGTTAVAATPAANT
AATAAAPTTTTPAAPAVAKPAPAKTLPAQATPPAPTSAGKPAPPRSAVAEAPARPAGNRQ
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctaccgacatccataccgaacccgccgaacctcgtgtcgccgccgcgtcgccc
gcggtcagcgtgctgcgcatcgtctccggcctgcacgccggcgctagccgtccgctgtcg
gcgcaggaaaccttgttgatcggcagcggcggcgattgcgacatcgtcctgtccgacgcc
ggcgtcgcaccgcaccacgccttcatcacccgcatgggcggcacggtctcgctgcgcgcg
gtcgatgcgcccttgcagatcgacggccagatcttgaacccgggcgatccggccgagctg
tcggcgatgcagcgcgtcgacctgggcagcgcctcgctcgcggtcggcgccagcgaagac
ccggcctgggcgacgatcctgccgaatctcggcgagatggccaagccgccgcgttcgtcg
atgcggcatctgcccttgattgccggtctggcggcgctgtcgctggtgtcggtggcgatc
gccgcggcggtgatgccgggcttcgagaaagaacccacggcgatggaagtggtgacgccg
ttgatcaaggagttctcgatcgtcggcggccgcgcggtcgagaacgaagacggcagcctg
gtgctgtcgggcacgatcaaggacgcgaccacgcgcgagatgatccgcaagcgcctggtc
accaacaacgtccaggcccggctcgacctgcgcaccggcgacgacatcgccgccgacgtg
cgcgaagtgctgcgcagccagggcctggcggtgcagacccgttacctcggcaacggcgac
gtcgaagtcgccgggcgcttcgccgaccaggacaagttcaagcgcgcgatcgcctcgcgt
gcgatgcaggacgtcaacggcgtgcgccgggtgatcccgcgcgacctcgacgagagcgcc
cagcccgcggccggcccgaccgtcgccgcggccgacaccgaacccaagaagccggtcagc
accgcgccgacccgggtcgtgcagatcgtgcgcggcaccaacccgcatgtgatcgacgtc
gacggcgcccgatacgcggtcggcgacgccatgcccgacggccgttcgctgatcgccatc
ggcgacaaggcctgggccctgaacaaggtcagtggccaggtcgaggagatcaaggcgcag
ccggtgaccgcggccgagcaagccgccatcgccgccgctgcggcgggtgttacgccggca
ccggccgcgacggcgccgaccggcacgacagcagtcgctgccacgcccgcggcgaatacc
gctgcgaccgctgcggcaccgacgacgaccactccggccgccccggccgtggccaagccg
gcgccggccaagaccttgcctgcgcaagccaccccgccggcgcccacctcggccggcaag
ccggcgccgccccgttcagccgtggccgaggcgcccgcgcgcccggccggcaaccgccag
taa
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