Labrenzia sp. PHM005: FJ695_01120
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Entry
FJ695_01120 CDS
T06152
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
labp
Labrenzia sp. PHM005
Brite
KEGG Orthology (KO) [BR:
labp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
labp03016
]
FJ695_01120
Enzymes [BR:
labp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
FJ695_01120
Transfer RNA biogenesis [BR:
labp03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FJ695_01120
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QDG74582
UniProt:
A0A4Y6RNF4
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All DBs
Position
complement(209295..209915)
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AA seq
206 aa
AA seq
DB search
MTIRYHKGDLPDLSAYESASAVAVDSETLGLNPHRDRLCVVQLSPGDGSADVVQIAKGQK
EAPNLAALMTDPSKPKIFHFARFDVAVLRHYLDIQVAPVWCTKIASKLVRTYTDRHGLKD
ITRELLGVELSKQQQSSDWAAETLSDAQLAYAASDVLHLHALKQKLDMMLAREERTHIAD
ACFDFLPTRAELDLKGWEETDIFAHS
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgacaatccgctaccacaaaggcgatttgccggatttgagtgcctatgaatcggcatcc
gcggtcgcggtggattcagaaaccctcggccttaatccgcatcgtgaccgcctatgtgtg
gttcaattgtcacctggcgatgggtcggccgacgttgtgcaaattgctaagggtcaaaag
gaagcgccaaatctggctgcgctcatgacggatccgtcgaaaccgaaaatatttcatttc
gcacggtttgacgtcgccgttttgcgtcactatctggacattcaggtcgcaccggtctgg
tgcactaagatcgcgtccaagctggtgcggacctacactgaccggcacggattgaaggac
atcacccgagagttgcttggcgtagaactgtcgaagcagcagcagagctcagattgggca
gcagaaacgctttcagatgcgcaattggcctatgccgcttcagatgttttgcatttgcat
gcgctgaagcaaaaactggatatgatgttggcgcgcgaggagcggacacacattgccgat
gcgtgttttgactttttgccaacacgtgccgaactcgacctgaagggttgggaagagact
gatatttttgcccattcctga
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