Labrenzia sp. PHM005: FJ695_01180
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Entry
FJ695_01180 CDS
T06152
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
labp
Labrenzia sp. PHM005
Pathway
labp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
labp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FJ695_01180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
labp03019
]
FJ695_01180
Messenger RNA biogenesis [BR:
labp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FJ695_01180
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Motif
Other DBs
NCBI-ProteinID:
QDG74591
LinkDB
All DBs
Position
complement(223425..223955)
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AA seq
176 aa
AA seq
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MTKLDFGPGYPEAVDGLPYRPCVGIMLINRQGKVWVGSRSQEANKNGYDYKWQMPQGGID
AGETPEKAARRELYEETSIHSVTLLEEAPEWFAYDYPEEILRNTRKGKHRGQAQRWLAYR
FEGSDDEVNILTPPDGHSAEFDDWRWEDVSRVPDLIVPFKRPVYEKVVAAFAHLTI
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
gtgacaaaattggattttggaccagggtatcctgaagctgtggatggcctgccgtaccgg
ccctgtgtcggcattatgctgatcaaccgccagggcaaggtctgggtcggcagccggtct
caagaagccaacaaaaacgggtacgattacaagtggcagatgccgcaaggcggcattgat
gccggcgaaacgccagaaaaagcggcgcgccgcgagctctatgaagaaacatcaatccat
tcggtgacacttttggaagaggcgcctgagtggtttgcctatgattatccggaagaaatc
ctgcgcaacacgcgcaagggaaaacaccgtgggcaggctcaaaggtggctggcttaccgg
ttcgaaggatctgacgacgaagtcaatattttgacgccgccagatggccattcggctgaa
tttgatgactggcgttgggaagatgtatcccgtgttccagatctcatcgtgccattcaaa
cggccggtttatgaaaaggtcgtcgcagcttttgcgcatttgacgatctga
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