Labrenzia sp. PHM005: FJ695_01530
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Entry
FJ695_01530 CDS
T06152
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
labp
Labrenzia sp. PHM005
Brite
KEGG Orthology (KO) [BR:
labp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
labp03400
]
FJ695_01530 (addA)
Enzymes [BR:
labp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FJ695_01530 (addA)
DNA repair and recombination proteins [BR:
labp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
FJ695_01530 (addA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
HD_assoc_2
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
QDG74650
UniProt:
A0A4Y6RQR3
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All DBs
Position
complement(289177..292719)
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AA seq
1180 aa
AA seq
DB search
MGAWRGGSGMSGFQIPDLTRQRQDLASRPRASAWVSANAGSGKTFVLSRRVVRLLLDGTD
PSRILALTFTKAAAAEMATRVFKILGTWVTMDDADLAKELFEIEGRQPDAARIVMARRLF
ARALETPGGLKIQTIHGFCEALLHQFPLEANVAGHFNVLDDRIAAELMAEARASVLYKAE
MEPESLFGAALASVIDLMSDGGAQKALDELIQNRDAFRRWTVDAGGLEPALAELAEDLDV
DPKLQISEFDHRFRSECPIDLNICLSYAEALNTGTKTDQGRADALVAANRQTDPDVFREA
WLPVFLTGKLEPRKSLATKKVAEAFPEMVEALIAEQGRLLDLLDGRRKVLTYEGTASLLR
LADAVITYYERAKTAKGYLDFEDLVVKTATLLAKSDAAQWVQYKLDQGLDHILVDEAQDT
SPRQWEVVNALASEFFVGDSGREKVRTLFAVGDEKQSIYSFQGAVPAYFDAMRRAFSGQA
ERAEQEFHSVNLQLSFRSTPDVLGAVDEVFKDENAYQGLSQEGVAPVHEAIRRDPGIVDI
WPLEAEAEITEPDDWRLPVDHVGSGSPMLKVAKRIASTIAGWMRDGTADPGDVMILVRKR
GPFVEALNRELKNLSIPAAGSDRLILTDHIAVQDLAALGRFLLLPEDDLSLAAVLKSPLF
DLDDTDLLEVARETDETIRPGTLWQMLVKRSETSPKWQTVRSQLEDWRARADFVPPYEFY
ARLLGADGGRQAFRRRLGVEVDDVLDEFLALTIAYEQAGTPGLEAFLAWMAAAPTEIKRE
LTNTKGMVRIMTVHGSKGLEARIVILVDPGAAPVSAIHDPAFLPRPRLENDLLPPALVWL
PPRTGRIAWHDEAVDTLRQGQEEEYRRLLYVALTRAEDRLVVCGWEPKRGAHESCWYSLV
SSALKPQARELTNAAGEVAGWRWQKDPDSPGAPQGRGAHGTENNDVSDVVLDLPDWAHQP
VKPVPKKTRLQPSRAFEAMEDKEGVEPVTALARLSAGRQPDSWPLERGRLVHRLLELLPN
LPDGERMTAARKFLDQSLKPEFISFKEPLLTELKEVLENPAFVSVFSQNARSEVSLTGTI
RAHDGTEVEVWGQIDRLIVDENEVVIVDYKTNLRPPENAAEIPLEYRAQLSVYRQLLKQI
YPEKRICAYLLWTSAPSLMEIPENLLEETFAGLSPDGRSA
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcttggcggggaggatccggcatgagcggatttcagatcccggatttgacgcgc
cagcggcaagacctcgcctcccgcccgcgcgcctcggcctgggtgagcgcaaatgcgggt
tccggcaaaaccttcgttctgtcgcgccgggtggtgcggctgctgctggacggcacagat
ccctcgcgcattttggcgctgaccttcaccaaggcagccgccgctgaaatggcgacccgt
gtcttcaagatcctcggcacctgggtgaccatggacgacgcggatcttgccaaggagctg
ttcgagatcgagggacggcagccggacgcagcccggatcgtaatggcccggcgcctgttt
gcccgggcactcgaaacaccgggcggcctcaaaatccagaccatccatggtttttgtgaa
gcgctgctgcatcagtttccgctggaggccaatgtcgccggccacttcaatgtgctcgat
gaccgcattgctgccgagttgatggccgaagcgcgtgcgagtgtcttgtataaggccgaa
atggagccggaaagcctcttcggtgcagcgcttgcctctgtcattgatctgatgagtgat
ggcggggcgcagaaggcacttgatgaactgattcagaatcgggatgcgtttcgccgctgg
acggtggatgccggcggtctggaacctgctcttgccgagctcgcggaggacctcgacgtt
gatcccaaacttcagatctctgaattcgatcatcgcttccgctccgaatgcccaatcgat
ctgaacatctgcttgagttacgccgaagcactgaacaccggcaccaagaccgatcagggc
agggcggatgcgctggtggccgcaaaccggcaaactgatccggatgttttccgggaggcc
tggctaccggtgttcctgaccggaaaattagagccgcgcaaatcgctggcgaccaagaaa
gtggctgaagccttccccgagatggttgaggcgttgattgccgaacagggccgtctgctg
gatcttctggacggccgccgcaaggtgctgacttatgaaggaacggcttcgcttctaagg
ctcgccgacgccgtcatcacctattacgagcgggccaagacggccaagggttatctcgat
tttgaagacctggtggtcaaaacagcaacactgctggccaagtccgatgccgcacaatgg
gtgcagtataaacttgatcaggggctcgaccatatccttgttgatgaggcgcaggatacc
agcccgcgccaatgggaagtggtcaacgcgctggcctccgagttcttcgtcggcgacagc
ggacgggagaaagtgcgcactctctttgccgtcggcgacgaaaaacagtcgatctattca
ttccagggcgcggttccggcctatttcgatgccatgcggcgggcgttttccggtcaggca
gaacgggcggaacaggaattccattcggtcaacctgcagctttcttttcgctccacgccg
gatgttcttggtgcggttgatgaggtcttcaaagacgagaacgcctatcaagggctgtct
caggagggtgtggcgccggtgcacgaggccatccgccgggatccgggcattgtcgacatt
tggccactggaagctgaagccgagataaccgagccggacgattggcggttaccggtggat
catgtcggctccggcagtccgatgttgaaggttgccaagcggatcgcgtcaaccatcgcc
ggatggatgcgcgacggaacggctgatccaggtgatgtgatgatcctcgtgcgcaagcgc
gggccttttgtggaagcgctgaaccgggagctgaaaaacctcagcattccggcggctggc
tcggatcgtctcatcctgaccgatcacatcgccgttcaggatcttgccgcactcggccgc
tttttgttgctgccggaggacgatctgtcccttgccgcggtcctaaaaagcccgttgttc
gatctggacgatacggatcttttggaagttgcccgcgaaacggatgagacaatccggccg
ggcacactgtggcagatgctggtcaaacggtcagagacgtcaccgaagtggcaaaccgtg
cgcagtcagctggaagactggcgcgcccgggccgactttgtgccgccttatgagttttat
gcccggctactgggcgctgatggcggacggcaggcatttcggcgcagacttggcgtcgag
gtcgacgacgtgctggatgaatttcttgcgctgaccattgcctacgaacaagctgggaca
ccgggactggaagcgttccttgcctggatggcagcggcgccaacagaaatcaaacgcgag
ctgaccaacaccaagggcatggtccggatcatgaccgtgcatgggtcaaaaggcctggag
gcgcggattgttatattggtggaccccggggccgcgccggtcagcgcgatccacgatcca
gcgtttttgccacgtccccgacttgaaaatgatctgctgccgccagcccttgtctggctg
ccgccaagaactgggcggatcgcctggcacgatgaggcggtcgatacgctccggcaggga
caggaagaagaataccggcgcctcctttatgtcgcactgacacgggccgaagaccggttg
gttgtctgcggctgggagccgaaacgtggggcgcatgaaagctgctggtattctcttgtt
tccagtgccttgaaaccgcaagcccgtgagttgacgaatgcagcgggcgaagtcgccgga
tggcgttggcaaaaggatcctgacagccccggtgcgccccaagggcgcggagcacacggc
actgaaaacaatgacgtttcagacgtggttctggacttgccggattgggcgcatcagccg
gtcaaacctgtgccaaagaagacccgcctccagccctcacgggcctttgaggcgatggaa
gacaaagaaggtgttgaacctgtaacggcacttgctcggctttctgccgggcgccagcca
gactcctggccgctggagcgtggccgtttggtgcaccgtctcctggagctgttgcctaat
ctgccggatggtgagcgcatgacagccgccagaaagttcttggatcagtccctcaaacca
gaatttatctcgttcaaggaaccgttgctgacggagctgaaggaggtactggaaaatccg
gcgttcgtttctgtgttttcacagaacgcgcggtcagaagtgtcattgacgggaacgatt
cgcgcgcatgacggcaccgaagtcgaagtttggggccaaatcgaccggctgattgtggat
gaaaacgaagttgtgattgtggattacaagaccaacctccgtccgccggagaatgcagct
gaaatcccattggagtaccgcgcgcagcttagtgtttacaggcagttgctgaaacagatt
tatccagaaaagcgcatctgcgcgtatttgctttggacctccgcaccgagcttgatggag
attccggaaaatctgcttgaggaaacattcgcaggtttgtcacctgatggtcgatccgct
tga
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