Labrenzia sp. PHM005: FJ695_01535
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Entry
FJ695_01535 CDS
T06152
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
labp
Labrenzia sp. PHM005
Brite
KEGG Orthology (KO) [BR:
labp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
labp03400
]
FJ695_01535 (addB)
Enzymes [BR:
labp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FJ695_01535 (addB)
DNA repair and recombination proteins [BR:
labp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
FJ695_01535 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QDG74651
UniProt:
A0A4Y6RNR7
LinkDB
All DBs
Position
complement(292689..295829)
Genome browser
AA seq
1046 aa
AA seq
DB search
MPDQPRLFTIPPSVSFLETLVDSLVEGHLVPGFRPLDDPLLLSSATLYLPTRRAARLLPD
LFQKKFGGKPVLLPVIRPVGDADEDAQSLSAAPDLEPLPQAMPLIDRHLAMTRLVMAWKG
ALRREALSLRSDEPLGLPASTADAAWLAGDLLTLMDEVETEEAEWSELAGLVPDDHARYW
QITLDFLKIVQEAWPAHLAELGKMDPKARRSALIRREAQRLAANPPKGPVIVAGVTGSVP
ATSELLKAVAGLDQGVIVLPGLDLDLDDLSWQALGQRPLPGRASFVAGKNHPPLSAHPQY
SLKQLLERLGVTRDAVNPLGQSDPILAQRQKLVSEALRPADTSDGWTAYLANTPVEIRET
ALVNVALMTARNEADEALSLAIALREAIELGEMAALISPDRMLTRRVAAELARWNIVADD
SAGRPLDQTAPAILAILAAKLALNGCEPIDLLALLKHPLARLGLPVKDIRSAARALERGV
IRGERPRPGTDGLIHAVEVCRAAAEDAHTPRWKKIHEGDWDVIVDLVDRLKQALAPLEDL
AGTKEPVQVEVLVQAHVDVMQAISADETGSADELYAAEAGEALASFWAGLLEAEASGLAV
PPREWPAVLSALMSGEAVRRRLPGDPRVQILGPMEARLQSFDFVILGSLNEGTWPQRTRN
DPWLNRPMKRDMGLEPPERRLGAAAHDFAQGMGAKRVLLSRAARADGAPTVASRWLQRLT
TLAGPETTSDMEGRGNRYTKLAALLDRQAGEVRPAVRPSPKPPLAARPKSLSITEIERLV
RDPYAIFARHSLELQPVDPVGGEPGAADKGNLIHDALAEFLSTWTGPFDDTAVQALLEIG
EELFEPLDAFPVIRALWWPRFQRIAAGFVAYEANRAPQIDKRFLEIGGGVELKLPGLDFR
LRGRADRIDLMTSGSLAVIDYKTGQVPSQKQVDALLSPQLPLEAAMIQRGGFKDVPAGEP
IGELLYLQLKGGTEPVLEVGRNPKDTALEELIEDAWQRLEQLIAHYAKEETGYLSRARVM
QGRQMDGPYDHLARAQEWALGGEDPA
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgccggatcagcctcgtcttttcacgatcccgccgtccgtttcctttcttgaaaccctt
gtcgacagtctcgttgagggacatctggtgcctgggttcaggccactggacgatccgttg
ctgctgtcatcggcaacgctctatctgccgacccgccgcgctgcccgtctgcttcccgat
ctgtttcagaagaagtttggcggcaagccggttcttttgcctgttatccggccggtcggt
gacgccgacgaagacgcgcaatctctgagcgctgcccctgacttggaacccttgccccag
gctatgccgttgatcgaccggcatctggccatgacccggctggtgatggcctggaagggc
gccttgcgccgggaggcattaagtctgcgctctgatgagccgttgggtttgccagcttcg
acggccgatgccgcttggctggcgggcgatctgctgaccctaatggacgaggttgaaacg
gaagaggccgaatggagcgaattggcaggcctggtgccagacgaccatgcccgctattgg
cagatcactttagattttctgaagattgtccaggaagcctggccagcgcatttggccgag
ctcggcaagatggacccaaaagcccgtcggtcggccctgatccgccgggaagcacagcgc
cttgccgccaatcctccgaaaggcccggtgattgtcgccggtgtcaccggttcggtgccg
gcaacctcagaacttctgaaggccgtggccggactggaccaaggcgtgattgttctaccc
ggtttggatcttgatctagacgacttgtcctggcaggcgcttggccagcggccgctgccg
ggccgcgcatccttcgtagctggtaaaaatcatccgccactatccgcgcatccgcaatat
tccttgaagcagcttctggaacggctcggtgtcacaagggatgcagtcaatccgctaggt
caatcagatccgatcttggcacaacggcaaaaactggtgtccgaggcgctgcgtccggca
gacacgtccgatggctggaccgcgtaccttgccaatacaccggtcgagattcgggaaacg
gcacttgtaaatgttgcgctgatgacggcccgcaacgaggcggacgaagccttgagcctt
gccatcgctttgcgcgaagccattgagcttggagaaatggcggcgctaatttcacctgac
aggatgttgacccgccgcgttgcagccgaacttgcacgctggaatatcgtcgccgatgac
agtgccggccgtccacttgaccagacggcaccggcgatcctggccatattggctgccaaa
ctggcgctcaacggctgtgaaccgattgacttgctggcgcttctgaaacatccactggcg
cggcttggtctgccggtgaaggacatccgttccgctgcccgtgcactagaacgtggtgtc
atccgtggggagcggccaagaccgggcacggatggtttgattcatgcggttgaggtttgc
cgtgcagctgctgaagatgctcatacgccgcgctggaagaaaattcacgaaggcgactgg
gacgtcattgtagatctggtagaccggctgaagcaggcacttgccccgcttgaagacctg
gctggcacaaaggaaccggtgcaggtcgaggttcttgttcaggcgcatgtcgatgtgatg
caggcgatctctgccgatgaaaccgggtcggcagatgaactttatgccgcggaagcggga
gaggcgttagccagtttttgggcgggacttttggaagctgaggccagtggtctagctgtg
ccgccgcgtgagtggcctgctgtcctgtctgcgctgatgtccggtgaagctgtacgccgc
cggctgcccggagatccgcgcgtgcagatcctcgggccgatggaagcacggctgcagtct
tttgactttgtcattctcggtagcctcaacgagggcacttggccacagcgcacccgcaac
gatccctggctgaaccggccgatgaagcgcgatatggggctggaaccgcctgaacgccgg
cttggagctgccgcgcatgactttgcccaagggatgggcgccaagcgtgttctgttatcg
cgggcggcacgggccgatggggcgcctacggttgcctctcgctggttgcaacggctgacg
acactggcaggcccggaaacaacatctgacatggaagggcggggcaaccggtacacaaaa
cttgcggcccttttggaccggcaagcaggcgaggtccgcccggcagtacggccttcgccc
aaaccgccgttggccgcccgaccaaagtcgctctctattacggaaatcgaacgcctggtg
cgcgatccctacgccatatttgcccgccattcgcttgaacttcagccggtcgacccggtt
ggaggtgagccgggcgcggccgacaagggcaatcttattcacgatgcgctggccgagttc
ttgtccacttggacagggccgtttgacgatacggcggtgcaggccctcttggaaattggc
gaagaactgtttgagcccctagatgcttttcctgtaattagggctctatggtggccgcgt
ttccagcggattgcagccgggttcgtggcctatgaggcaaacagggcgccacagatcgac
aagcgctttctggaaatcggtggaggggtcgaattgaagcttccggggcttgatttccgt
ctgcgcgggcgggctgaccggattgatctgatgacctccgggtcgttggccgtgattgat
tacaagaccgggcaagtgccgtcgcagaaacaggtagatgcgctcctgtcgccgcagtta
cccctggaagctgccatgatccagcgcggaggtttcaaggatgttcctgctggagagcct
atcggggaacttctttacctccagctcaaaggtggaacagaaccggttctggaagttggc
cggaacccgaaggacactgcactggaagaattgatagaggatgcctggcagcggctggaa
cagttgatcgcccactatgccaaggaagaaactgggtatctctcccgcgcccgggtgatg
cagggccggcaaatggacgggccctatgatcacttggcacgtgcccaggaatgggcgctt
ggcggggaggatccggcatga
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