Labrenzia sp. PHM005: FJ695_01650
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Entry
FJ695_01650 CDS
T06152
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
labp
Labrenzia sp. PHM005
Pathway
labp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
labp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FJ695_01650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
labp03400
]
FJ695_01650
Enzymes [BR:
labp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FJ695_01650
DNA repair and recombination proteins [BR:
labp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FJ695_01650
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Zn_ribbon_PriA
Helicase_C
AAA_30
Zn_ribbon_6
PmbA_TldD_1st
TrwB_AAD_bind
zf-CHY
ADDB_N
Motif
Other DBs
NCBI-ProteinID:
QDG74672
UniProt:
A0A4Y6RNP9
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All DBs
Position
complement(323395..325590)
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AA seq
731 aa
AA seq
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MLFDDLEPKETIASVLVPVAVPVAYTYKVPTGQTVVPGTIVKVPLGPREVIGAVWDGEPD
AAINPKKLKSISHIYETTPPLDKDLRRFVDWVASWTLGAPGMVVRMVLRSEEALEPEAPV
PGVRRIEGAEPERMTPARRRVLETMEDGFAWTKSGLAHAAGVSASVIDGLIHQEVLEVVF
MPAAPPPPKPQLDYAQKELTPAQQAAAETLQDSFDKGAAVTLIDGVTGSGKTEVYFEAIA
EALKRDKQALVLLPEIALTEQFLRRFEQRFGVYPAEWHSEITPKNRARVWRGVASGDVRV
VIGARSSLFLPFKELGLIIVDEEHDGAFKQDDRVPYSARDMAVVRGHISRFPVVLASATP
SIESRVNAEQGRYGLVELPDRASGAALPDLSAIDMRLDGPEQGRWLAPGLVGAIKESYAN
GDQSLLFLNRRGYAPLTLCRTCGHRFQCPHCSTWLVEHRFQKKLVCHHCGHNERVPESCP
SCQSTNTLVACGPGVERIAEEVSDLFPQARTLVLSSDLPGGPERLKREMKIVEEGGADII
IGTQLVAKGHNFPKLKLVGVVDADLGLAHGDPRAAEKTFQLLAQVTGRAGRVTGGGRGFL
QTYSADHPVIRALLSNDKHAFYQAEIEARRAAGLPPFGRLAAVVISGPDKVFAEGYARQL
VRAAPQDTAVTLLGPAEAALAMVRGRYRFRLLAMAPRQYDLQTYLRAWLAAGPKPSKGLR
VQVDIDPQHFL
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
gtgctgtttgacgatttggagccaaaagagacgatagcgagcgtactggtgccggtcgcg
gtgccggtagcctatacatataaagtgccgacgggccagacggtcgttcctggcaccatc
gtcaaggttccacttggaccccgcgaagtgattggcgctgtctgggatggggagccggat
gcagcgatcaacccgaaaaaactaaaatccatttcccatatctatgagaccacaccgccg
ctggataaagatctgcgccggtttgtcgactgggtggctagctggacacttggtgcaccc
ggcatggtggtgcgcatggtgctcagatcagaagaggctttggagccggaagcacccgtt
cccggggttaggcgtattgagggggctgaaccagagcgcatgaccccggcgcgccggcgg
gttctggaaaccatggaagatggcttcgcctggaccaagagcgggctggctcatgcggcc
ggtgtcagcgcgtcggtgatcgacgggctgatccatcaggaagttctggaagttgttttc
atgccggctgcaccgccgccaccgaaaccccagttagactatgcgcaaaaggaactgact
ccggctcagcaagccgctgctgaaacgttgcaagacagttttgataagggcgcggcggtg
accttaatcgatggtgtcacaggatcaggaaagaccgaagtctatttcgaggcgattgct
gaagcactcaaacgggacaaacaggcgctggtccttttgcccgaaattgcgctgacggaa
caattcttgcgccggttcgaacaaagattcggcgtctatcctgctgaatggcactccgaa
atcacgccaaaaaaccgggcccgggtgtggcgtggggtcgcctctggcgatgtccgtgtt
gtgattggtgcgcgttcgtccttgtttcttccgtttaaggaactcggactaatcatcgtc
gatgaagagcacgatggcgccttcaagcaggatgaccgtgtgccctacagcgcccgggac
atggcagtggtgcggggtcatatctcaagatttcctgttgtgctggcgtccgccacgccg
tcgatcgaaagccgggtgaacgctgaacaaggacggtatggtctcgtagaactgcccgac
cgagcctcgggcgcggcgttgccggacctgtccgccatcgacatgcgtctggacggaccg
gagcaggggcgctggctggcaccgggtttggtgggtgcaatcaaagaatcttatgccaac
ggcgatcaatctcttttgttcttaaaccgccgcggatatgcccccctgacattatgtcgc
acctgcggtcatcgcttccaatgtccgcattgcagcacctggctggtcgagcaccggttt
cagaaaaaactagtctgccatcactgcggtcacaatgagcgcgttccggagagttgtccg
tcctgtcaaagcaccaatacactggttgcctgcgggccgggggtcgagcggattgcggaa
gaagtcagcgacctttttccccaagcacgcacgttggtgttgtcatccgatctgcccggc
gggccagaacgcctgaagcgggaaatgaagatcgtcgaagaaggcggcgccgatatcatt
atcggaacgcagttggtcgccaaagggcataattttccgaaactcaagctggttggtgtg
gtcgatgccgatctgggtcttgcccatggagatccgcgcgctgcggaaaaaaccttccag
ctgctggcgcaggtgaccggccgcgctggccgggtcactggcggtggtcggggttttctt
cagacctacagcgcggaccatccggtgatcagagcgcttttgtctaatgacaaacatgcc
ttctaccaagcagagattgaagcccgccgtgcagccggactgcctccgtttggccgcctg
gcggccgtggtgatatcagggccggacaaggtttttgctgaagggtacgcccggcagctt
gtccgcgccgcgcctcaggataccgccgttacgctgctcgggcctgctgaagcggccctt
gcgatggttcgtgggcgctaccggttccgcctccttgccatggcaccacgccaatatgat
ttacagacttatcttcgtgcgtggctcgcagctggaccaaagcccagcaaaggtctgcgt
gttcaggtcgacatagaccctcagcatttcctttga
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